! Started logfile: J0838-3836_X_2004_05_08_yyk_uvs.log on Wed Dec  7 00:11:25 2005
obs J0838-3836_X_2004_05_08_yyk_uve.fits
! Reading UV FITS file: J0838-3836_X_2004_05_08_yyk_uve.fits
! AN table 1: 6 integrations on 45 of 45 possible baselines.
! Apparent sampling: 0.207407 visibilities/baseline/integration-bin.
! *** This seems a bit low - see "help observe" on the binwid argument.
! Found source: J0838-3836
! 
! There are 4 IFs, and a total of 4 channels:
! 
!  IF  Channel    Frequency  Freq offset  Number of   Overall IF
!       origin    at origin  per channel   channels    bandwidth
!  ------------------------------------------------------------- (Hz)
!  01        1  8.40997e+09        8e+06          1        8e+06
!  02        2  8.47997e+09        8e+06          1        8e+06
!  03        3  8.79497e+09        8e+06          1        8e+06
!  04        4  8.89997e+09        8e+06          1        8e+06
! 
! Polarization(s): RR
! 
! Read 1434 lines of history.
! 
! Reading 224 visibilities.
select I
! Polarization I is unavailable.
! Selecting polarization: RR,  channels: 1..4
! Reading IF 1 channels: 1..1
! Reading IF 2 channels: 2..2
! Reading IF 3 channels: 3..3
! Reading IF 4 channels: 4..4
![@muppet J0838-3836_X_2004_05_08_yyk]
integer clean_niter
clean_niter = 100
float clean_gain
clean_gain = 0.04
float dynam
dynam = 6.0
float amp_soltime1
amp_soltime1 = 10
float amp_soltime2
amp_soltime2 = 1
float phase_soltime1
phase_soltime1=10
float phase_soltime2
phase_soltime2=0.5
float phase_soltime
phase_soltime=phase_soltime1
float ampcor_selflim
ampcor_selflim=1.20
float thresh
thresh = 0.10
float win_mult
win_mult = 1.8
float time_av
time_av = 30
float old_peak
float new_peak
float flux_cutoff
mapsize field_size, field_cell
! Map grid = 512x512 pixels with 0.200x0.200 milli-arcsec cellsize.
phase_soltime=phase_soltime1
print "uvstat(rms)=",uvstat(rms),"Jy"
! uvstat(rms)= 0.124387 Jy 
startmod ,phase_soltime
! Applying default point source starting model.
! Performing phase self-cal over 10 minute time intervals
! Adding 1 model components to the UV plane model.
! The established model now contains 1 components and 1 Jy
! 
! Correcting IF 1.
!  A total of 36 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 2.
!  A total of 32 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 3.
!  A total of 36 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 4.
!  A total of 60 telescope corrections were flagged in sub-array 1.
! 
! Fit before self-cal, rms=0.896910Jy  sigma=15.071680
! Fit after  self-cal, rms=0.896368Jy  sigma=15.064312
! clrmod: Cleared the established, tentative and continuum models.
! Redundant starting model cleared.
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=0.6077 mas, bmaj=1.956 mas, bpa=10.18 degrees
! Estimated noise=4.3032 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=100  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.0834552 Jy
! Component: 100  -  total flux cleaned = 0.0837458 Jy
! Total flux subtracted in 100 components = 0.0837458 Jy
! Clean residual min=-0.008285 max=0.008297 Jy/beam
! Clean residual mean=-0.000032 rms=0.002868 Jy/beam
! Combined flux in latest and established models = 0.0837458 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 14 model components to the UV plane model.
! The established model now contains 14 components and 0.0837458 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.063437Jy  sigma=0.979444
! Fit after  self-cal, rms=0.063384Jy  sigma=0.979038
! Inverting map 
print "************** FINISHED UNIFORM WEIGHTING CLEAN **************"
! ************** FINISHED UNIFORM WEIGHTING CLEAN ************** 
! 
uvw 0,-2
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -2.
! Radial weighting is not currently selected.
win_mult = win_mult * 1.6
clean_niter = clean_niter * 2
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=0.7062 mas, bmaj=2.579 mas, bpa=14.54 degrees
! Estimated noise=3.78374 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.00418189 Jy
! Component: 100  -  total flux cleaned = -0.00510953 Jy
! Component: 150  -  total flux cleaned = -0.00541807 Jy
! Component: 200  -  total flux cleaned = -0.00573861 Jy
! Total flux subtracted in 200 components = -0.00573861 Jy
! Clean residual min=-0.004715 max=0.004663 Jy/beam
! Clean residual mean=-0.000024 rms=0.001379 Jy/beam
! Combined flux in latest and established models = 0.0780072 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 35 model components to the UV plane model.
! The established model now contains 47 components and 0.0780072 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.061821Jy  sigma=0.950168
! Fit after  self-cal, rms=0.061830Jy  sigma=0.949518
! Inverting map 
print "************** FINISHED NATURAL WEIGHTING CLEAN **************"
! ************** FINISHED NATURAL WEIGHTING CLEAN ************** 
! 
selflims ampcor_selflim
! Selfcal amplitude corrections will be limited to 0.833333 -> 1.2.
! Selfcal phase corrections will not be limited.
gscale
! Performing overall amplitude self-cal
! 
! Correcting IF 1.
!  Amplitude normalization factor in sub-array 1: 0.995995
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        1.00*    HN        1.00*    KP        1.10     
!   LA        1.03     MK        1.00*    NL        1.00*    OV        0.93     
!   PT        1.00*    SC        0.98     
! 
! 
! Correcting IF 2.
!  Amplitude normalization factor in sub-array 1: 1.00964
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        1.00*    HN        1.00*    KP        0.87     
!   LA        0.93     MK        1.01     NL        1.00*    OV        1.11     
!   PT        1.00*    SC        1.00     
! 
! 
! Correcting IF 3.
!  Amplitude normalization factor in sub-array 1: 1.01081
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        1.00*    HN        1.00*    KP        0.93     
!   LA        0.93     MK        1.00*    NL        1.00*    OV        1.03     
!   PT        1.00*    SC        1.00     
! 
! 
! Correcting IF 4.
!  Amplitude normalization factor in sub-array 1: 1
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.00*    FD        0.00*    HN        0.00*    KP        0.00*    
!   LA        0.00*    MK        0.00*    NL        0.00*    OV        0.00*    
!   PT        0.00*    SC        0.00*    
! 
! 
! Fit before self-cal, rms=0.061830Jy  sigma=0.949518
! Fit after  self-cal, rms=0.060508Jy  sigma=0.936994
selfcal false, false, phase_soltime
! Performing phase self-cal over 10 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.060508Jy  sigma=0.936994
! Fit after  self-cal, rms=0.060503Jy  sigma=0.936982
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=0.7126 mas, bmaj=2.581 mas, bpa=14.6 degrees
! Estimated noise=3.68927 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.00322746 Jy
! Component: 100  -  total flux cleaned = -0.00388467 Jy
! Component: 150  -  total flux cleaned = -0.00369628 Jy
! Component: 200  -  total flux cleaned = -0.00367082 Jy
! Total flux subtracted in 200 components = -0.00367082 Jy
! Clean residual min=-0.002833 max=0.002790 Jy/beam
! Clean residual mean=-0.000000 rms=0.000809 Jy/beam
! Combined flux in latest and established models = 0.0743364 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 32 model components to the UV plane model.
! The established model now contains 79 components and 0.0743364 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.060040Jy  sigma=0.928357
! Fit after  self-cal, rms=0.060020Jy  sigma=0.927740
! Inverting map 
print "************** FINISHED AMPLITUDE GSCALE SELF-CAL **************"
! ************** FINISHED AMPLITUDE GSCALE SELF-CAL ************** 
! 
phase_soltime=phase_soltime2
selfcal false, false, phase_soltime
! Performing phase self-cal over 0.5 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.060020Jy  sigma=0.927740
! Fit after  self-cal, rms=0.054073Jy  sigma=0.836131
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.00138517 Jy
! Component: 100  -  total flux cleaned = 0.00065514 Jy
! Component: 150  -  total flux cleaned = 0.00108704 Jy
! Component: 200  -  total flux cleaned = 0.00106946 Jy
! Total flux subtracted in 200 components = 0.00106946 Jy
! Clean residual min=-0.002049 max=0.002133 Jy/beam
! Clean residual mean=-0.000006 rms=0.000618 Jy/beam
! Combined flux in latest and established models = 0.0754058 Jy
! Performing phase self-cal over 0.5 minute time intervals
! Adding 39 model components to the UV plane model.
! The established model now contains 116 components and 0.0754058 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.053588Jy  sigma=0.826085
! Fit after  self-cal, rms=0.053279Jy  sigma=0.819708
! Inverting map 
print "*** FINISHED NATURAL WEIGHTING CLEAN with shorter phase_soltime ***"
! *** FINISHED NATURAL WEIGHTING CLEAN with shorter phase_soltime *** 
! 
dynam = dynam - 0.25
restore
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 0.7126 x 2.581 at 14.6 degrees (North through East)
! Clean map  min=-0.0068318  max=0.088232 Jy/beam
if(peak(flux) > thresh)
  selfcal true, true, amp_soltime1
  selfcal false, false, phase_soltime
  flux_cutoff = imstat(rms) * dynam
  repeat
    if (peak(flux) > flux_cutoff) peakwin win_mult
    clean clean_niter,clean_gain
    flux_cutoff = imstat(rms) * dynam
    selfcal false,false,phase_soltime
    new_peak = peak(flux)
    until(new_peak<=flux_cutoff)
  selfcal true, true, amp_soltime2
  selfcal false, false, phase_soltime
  flux_cutoff = imstat(rms) * dynam
  repeat
    if (peak(flux) > flux_cutoff) peakwin win_mult
    clean clean_niter,clean_gain
    flux_cutoff = imstat(rms) * dynam
    selfcal false,false,phase_soltime
    new_peak = peak(flux)
    until(new_peak<=flux_cutoff)
  print "************** FINISHED AMPLITUDE SELF-CAL **************"
  end if
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 70 mega-wavelengths.
win_mult = win_mult * 1.4
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=2.88 mas, bmaj=10.68 mas, bpa=4.235 degrees
! Estimated noise=5.27081 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -3.86205e-05 Jy
! Component: 100  -  total flux cleaned = 0.000110096 Jy
! Component: 150  -  total flux cleaned = 0.000275948 Jy
! Component: 200  -  total flux cleaned = 0.000352589 Jy
! Total flux subtracted in 200 components = 0.000352589 Jy
! Clean residual min=-0.001343 max=0.001273 Jy/beam
! Clean residual mean=-0.000010 rms=0.000317 Jy/beam
! Combined flux in latest and established models = 0.0757584 Jy
! Performing phase self-cal over 0.5 minute time intervals
! Adding 33 model components to the UV plane model.
! The established model now contains 148 components and 0.0757584 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.053157Jy  sigma=0.819245
! Fit after  self-cal, rms=0.053162Jy  sigma=0.818674
! Inverting map 
uvtaper 0,0
! No UV-taper is currently set.
win_mult = win_mult / 1.4
print "************** FINISHED TAPERING SELF-CAL CLEAN **************"
! ************** FINISHED TAPERING SELF-CAL CLEAN ************** 
! 
print "************** CLEARING MODEL AND STARTING OVER **********"
! ************** CLEARING MODEL AND STARTING OVER ********** 
clrmod true,true,true
! clrmod: Cleared the established, tentative and continuum models.
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
clean clean_niter, clean_gain
! Inverting map and beam 
! Estimated beam: bmin=0.6116 mas, bmaj=1.959 mas, bpa=10.18 degrees
! Estimated noise=4.2088 mJy/beam.
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.0843519 Jy
! Component: 100  -  total flux cleaned = 0.0792001 Jy
! Component: 150  -  total flux cleaned = 0.0761632 Jy
! Component: 200  -  total flux cleaned = 0.0757791 Jy
! Total flux subtracted in 200 components = 0.0757791 Jy
! Clean residual min=-0.005107 max=0.005196 Jy/beam
! Clean residual mean=-0.000020 rms=0.001567 Jy/beam
! Combined flux in latest and established models = 0.0757791 Jy
uvw 0,-2
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -2.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Adding 32 model components to the UV plane model.
! The established model now contains 32 components and 0.0757791 Jy
! Inverting map and beam 
! Estimated beam: bmin=0.7126 mas, bmaj=2.581 mas, bpa=14.6 degrees
! Estimated noise=3.68927 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  keep
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.0028698 Jy
! Component: 100  -  total flux cleaned = -0.00231997 Jy
! Component: 150  -  total flux cleaned = -0.00196158 Jy
! Component: 200  -  total flux cleaned = -0.0013925 Jy
! Total flux subtracted in 200 components = -0.0013925 Jy
! Clean residual min=-0.002596 max=0.002542 Jy/beam
! Clean residual mean=-0.000012 rms=0.000785 Jy/beam
! Combined flux in latest and established models = 0.0743866 Jy
! Adding 38 model components to the UV plane model.
! The established model now contains 67 components and 0.0743866 Jy
! Inverting map 
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 70 mega-wavelengths.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=2.88 mas, bmaj=10.68 mas, bpa=4.235 degrees
! Estimated noise=5.27081 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  keep
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.0010913 Jy
! Component: 100  -  total flux cleaned = -0.00107589 Jy
! Component: 150  -  total flux cleaned = -0.00106026 Jy
! Component: 200  -  total flux cleaned = -0.00104025 Jy
! Total flux subtracted in 200 components = -0.00104025 Jy
! Clean residual min=-0.002702 max=0.002582 Jy/beam
! Clean residual mean=0.000006 rms=0.000743 Jy/beam
! Combined flux in latest and established models = 0.0733464 Jy
! Adding 32 model components to the UV plane model.
! The established model now contains 99 components and 0.0733464 Jy
! Inverting map 
uvtaper 0,0
! No UV-taper is currently set.
clean
! Inverting map and beam 
! Estimated beam: bmin=0.7126 mas, bmaj=2.581 mas, bpa=14.6 degrees
! Estimated noise=3.68927 mJy/beam.
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -8.44235e-06 Jy
! Component: 100  -  total flux cleaned = -0.000319736 Jy
! Component: 150  -  total flux cleaned = -0.000792479 Jy
! Component: 200  -  total flux cleaned = -0.00129504 Jy
! Total flux subtracted in 200 components = -0.00129504 Jy
! Clean residual min=-0.002220 max=0.002246 Jy/beam
! Clean residual mean=-0.000008 rms=0.000633 Jy/beam
! Combined flux in latest and established models = 0.0720513 Jy
selfcal false, false, phase_soltime
! Performing phase self-cal over 0.5 minute time intervals
! Adding 37 model components to the UV plane model.
! The established model now contains 134 components and 0.0720513 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.053275Jy  sigma=0.819616
! Fit after  self-cal, rms=0.053265Jy  sigma=0.818752
wmodel J0838-3836_X_2004_05_08_yyk\_map.mod
! Writing 134 model components to file: J0838-3836_X_2004_05_08_yyk_map.mod
wobs J0838-3836_X_2004_05_08_yyk\_uvs.fits
! Writing UV FITS file: J0838-3836_X_2004_05_08_yyk_uvs.fits
wwins J0838-3836_X_2004_05_08_yyk\_map.win
! wwins: No CLEAN windows to write.
! Error occured in command: wwins
![Exited script file: muppet]
! 
wmap "J0838-3836_X_2004_05_08_yyk\_map.fits"
! Inverting map 
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 0.7126 x 2.581 at 14.6 degrees (North through East)
! Clean map  min=-0.0081034  max=0.093377 Jy/beam
! Writing clean map to FITS file: J0838-3836_X_2004_05_08_yyk_map.fits
float peak_flux
peak_flux = peak(flux,max)
print "The peak flux is",peak_flux
! The peak flux is 0.093377 
invert
! Inverting map 
float image_rms
image_rms = imstat(rms)
print "The final image rms is",image_rms
! The final image rms is 0.000605122 
device "J0838-3836_X_2004_05_08_yyk\_map.eps/VPS"
! Attempting to open device: 'J0838-3836_X_2004_05_08_yyk_map.eps/VPS'
loglevs 100*3*image_rms/peak_flux
! The new contour levels are:
!  -1.94412 1.94412 3.88825 7.7765 15.553 31.106 62.212
print "clev=",int(3*image_rms*10000)/10000
! clev= 0.0018 
print "peak=",int(peak_flux*1000)/1000
! peak= 0.093 
mapcolor none
! Mapplot colormap: none, contrast: 1 brightness: 0.5.
mapplot cln
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 0.7126 x 2.581 at 14.6 degrees (North through East)
! Clean map  min=-0.0081034  max=0.093377 Jy/beam
mapcolor color, 0.9
! Mapplot colormap: rainbow, contrast: 0.9 brightness: 0.5.
device "J0838-3836_X_2004_05_08_yyk\_map.gif/gif"
! Attempting to open device: 'J0838-3836_X_2004_05_08_yyk_map.gif/gif'
mapplot cln
quit
! Quitting program
! Log file J0838-3836_X_2004_05_08_yyk_uvs.log closed on Wed Dec  7 00:11:28 2005