! Started logfile: /d2/scr/pima/rdv96_uvs/J1606+5521_X_uvs.log on Fri Dec 20 23:45:52 2013
obs /d2/scr/pima/rdv96_uvs/J1606+5521_X_uva.fits
! Reading UV FITS file: /d2/scr/pima/rdv96_uvs/J1606+5521_X_uva.fits
! AN table 1: 22 integrations on 15 of 15 possible baselines.
! AN table 2: 22 integrations on 15 of 15 possible baselines.
! Apparent sampling: 0.387879 visibilities/baseline/integration-bin.
! *** This seems a bit low - see "help observe" on the binwid argument.
! Found source: J1606+5521
! 
! There are 4 IFs, and a total of 4 channels:
! 
!  IF  Channel    Frequency  Freq offset  Number of   Overall IF
!       origin    at origin  per channel   channels    bandwidth
!  ------------------------------------------------------------- (Hz)
!  01        1  8.40599e+09        8e+06          1        8e+06
!  02        2  8.47599e+09        8e+06          1        8e+06
!  03        3  8.79099e+09        8e+06          1        8e+06
!  04        4  8.89599e+09        8e+06          1        8e+06
! 
! Polarization(s): RR
! 
! Read 0 lines of history.
! 
! Reading 1024 visibilities.
select RR
! Selecting polarization: RR,  channels: 1..4
! Reading IF 1 channels: 1..1
! Reading IF 2 channels: 2..2
! Reading IF 3 channels: 3..3
! Reading IF 4 channels: 4..4
print "field_size =",field_size
! field_size = 1024 
print "field_cell =",field_cell
! field_cell = 0.2 
print "taper_size =",taper_size
! taper_size = 70 
![@/home/lpetrov/bin/rdv_muppet /d2/scr/pima/rdv96_uvs/J1606+5521_X]
integer clean_niter
clean_niter = 100
float clean_gain
clean_gain = 0.03
float dynam
dynam = 6.0
float soltime1
soltime1 = 800000
float soltime2
soltime2 = 15
float soltime3
soltime3 = 1
float thresh
thresh = 0.5
float win_mult
win_mult = 1.8
float old_peak
float new_peak
float flux_cutoff
selfant "",false
! 1:BR       self-cal  status=correctable  weight=1
! 1:FD       self-cal  status=correctable  weight=1
! 1:KP       self-cal  status=correctable  weight=1
! 1:LA       self-cal  status=correctable  weight=1
! 1:OV       self-cal  status=correctable  weight=1
! 1:PT       self-cal  status=correctable  weight=1
! 2:FD       self-cal  status=correctable  weight=1
! 2:KP       self-cal  status=correctable  weight=1
! 2:LA       self-cal  status=correctable  weight=1
! 2:NL       self-cal  status=correctable  weight=1
! 2:OV       self-cal  status=correctable  weight=1
! 2:PT       self-cal  status=correctable  weight=1
system "rm /tmp/ff.ff"
mapsize field_size, field_cell
! Map grid = 1024x1024 pixels with 0.200x0.200 milli-arcsec cellsize.
startmod
! Applying default point source starting model.
! Performing phase self-cal
! Adding 1 model components to the UV plane model.
! The established model now contains 1 components and 1 Jy
! 
! Correcting IF 1.
!  A total of 66 telescope corrections were flagged in sub-array 1.
!  A total of 54 telescope corrections were flagged in sub-array 2.
! 
! Correcting IF 2.
!  A total of 66 telescope corrections were flagged in sub-array 1.
!  A total of 54 telescope corrections were flagged in sub-array 2.
! 
! Correcting IF 3.
!  A total of 66 telescope corrections were flagged in sub-array 1.
!  A total of 54 telescope corrections were flagged in sub-array 2.
! 
! Correcting IF 4.
!  A total of 66 telescope corrections were flagged in sub-array 1.
!  A total of 54 telescope corrections were flagged in sub-array 2.
! 
! Fit before self-cal, rms=0.996046Jy  sigma=0.648960
! Fit after  self-cal, rms=0.950086Jy  sigma=0.709991
! clrmod: Cleared the established, tentative and continuum models.
! Redundant starting model cleared.
print "=== Flag out IVS stations"
! === Flag out IVS stations 
integer lun
string  cfg_file
lun = outfile ( "/tmp/ff.ff" ) 
do i=1,nsub
  do j=1,ntel(i)
    fprintf lun, "%s\n", telname(j,i)
    end do
  end do
close ( lun )
system "/home/lpetrov/bin/dimap_flag_process.csh /tmp/ff.ff"
![@/tmp/ff.ff \]
![Exited script file: /tmp/ff.ff]
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=7.332 mas, bmaj=8.589 mas, bpa=-87.73 degrees
! Estimated noise=48.8355 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=100  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.0378882 Jy
! Component: 100  -  total flux cleaned = 0.0392877 Jy
! Total flux subtracted in 100 components = 0.0392877 Jy
! Clean residual min=-0.007285 max=0.007293 Jy/beam
! Clean residual mean=0.000745 rms=0.004276 Jy/beam
! Combined flux in latest and established models = 0.0392877 Jy
! Performing phase self-cal
! Adding 40 model components to the UV plane model.
! The established model now contains 40 components and 0.0392877 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.039848Jy  sigma=0.027384
! Fit after  self-cal, rms=0.039524Jy  sigma=0.027073
! Inverting map 
print "=== Finished uniform weighting clean ==="
! === Finished uniform weighting clean === 
uvw 0,-1
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
win_mult = win_mult * 1.6
clean_niter = clean_niter * 2
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=7.114 mas, bmaj=9.217 mas, bpa=-71.67 degrees
! Estimated noise=40.9999 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -0.00289231 Jy
! Component: 100  -  total flux cleaned = -0.000737598 Jy
! Component: 150  -  total flux cleaned = -5.85397e-05 Jy
! Component: 200  -  total flux cleaned = -0.000250637 Jy
! Total flux subtracted in 200 components = -0.000250637 Jy
! Clean residual min=-0.000954 max=0.000941 Jy/beam
! Clean residual mean=0.000054 rms=0.000478 Jy/beam
! Combined flux in latest and established models = 0.0390371 Jy
! Performing phase self-cal
! Adding 115 model components to the UV plane model.
! The established model now contains 155 components and 0.039037 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.038580Jy  sigma=0.025236
! Fit after  self-cal, rms=0.038716Jy  sigma=0.025207
! Inverting map 
print "=== Finished natural weighting clean for VLBI sites ==="
! === Finished natural weighting clean for VLBI sites === 
gscale true
! Performing overall amplitude self-cal
! 
! Correcting IF 1.
!  A total of 66 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.00*    FD        0.00*    KP        0.00*    LA        0.00*    
!   OV        0.00*    PT        0.00*    
! 
!  A total of 30 telescope corrections were flagged in sub-array 2.
!  Telescope amplitude corrections in sub-array 2:
!   FD        1.14     KP        1.05     LA        1.15     NL        1.00*    
!   OV        1.00*    PT        0.85     
! 
! 
! Correcting IF 2.
!  A total of 66 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.00*    FD        0.00*    KP        0.00*    LA        0.00*    
!   OV        0.00*    PT        0.00*    
! 
!  A total of 30 telescope corrections were flagged in sub-array 2.
!  Telescope amplitude corrections in sub-array 2:
!   FD        0.75     KP        1.11     LA        0.96     NL        1.00*    
!   OV        1.00*    PT        1.13     
! 
! 
! Correcting IF 3.
!  A total of 66 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.00*    FD        0.00*    KP        0.00*    LA        0.00*    
!   OV        0.00*    PT        0.00*    
! 
!  A total of 30 telescope corrections were flagged in sub-array 2.
!  Telescope amplitude corrections in sub-array 2:
!   FD        0.88     KP        1.11     LA        1.00     NL        1.00*    
!   OV        1.00*    PT        0.88     
! 
! 
! Correcting IF 4.
!  A total of 66 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.00*    FD        0.00*    KP        0.00*    LA        0.00*    
!   OV        0.00*    PT        0.00*    
! 
!  A total of 30 telescope corrections were flagged in sub-array 2.
!  Telescope amplitude corrections in sub-array 2:
!   FD        1.17     KP        0.85     LA        0.84     NL        1.00*    
!   OV        1.00*    PT        1.13     
! 
! 
! Fit before self-cal, rms=0.038716Jy  sigma=0.025207
! Fit after  self-cal, rms=0.035609Jy  sigma=0.024365
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=6.392 mas, bmaj=12.74 mas, bpa=77.97 degrees
! Estimated noise=66.3398 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.000778805 Jy
! Component: 100  -  total flux cleaned = 0.00082668 Jy
! Component: 150  -  total flux cleaned = 0.00088165 Jy
! Component: 200  -  total flux cleaned = 0.00100148 Jy
! Total flux subtracted in 200 components = 0.00100148 Jy
! Clean residual min=-0.000501 max=0.000511 Jy/beam
! Clean residual mean=-0.000007 rms=0.000169 Jy/beam
! Combined flux in latest and established models = 0.0400385 Jy
! Performing phase self-cal
! Adding 26 model components to the UV plane model.
! The established model now contains 181 components and 0.0400385 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.035566Jy  sigma=0.024354
! Fit after  self-cal, rms=0.035837Jy  sigma=0.024316
! Inverting map 
selfcal true, true, soltime1
! Performing amp+phase self-cal over 800000 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.035837Jy  sigma=0.024316
! Fit after  self-cal, rms=0.037036Jy  sigma=0.024275
dynam = dynam - 0.75
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=6.401 mas, bmaj=12.74 mas, bpa=77.9 degrees
! Estimated noise=66.2085 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 2.70182e-05 Jy
! Component: 100  -  total flux cleaned = -9.93407e-05 Jy
! Component: 150  -  total flux cleaned = -0.000380202 Jy
! Component: 200  -  total flux cleaned = -0.00104882 Jy
! Total flux subtracted in 200 components = -0.00104882 Jy
! Clean residual min=-0.000684 max=0.000664 Jy/beam
! Clean residual mean=-0.000009 rms=0.000188 Jy/beam
! Combined flux in latest and established models = 0.0389897 Jy
selfcal
! Performing phase self-cal
! Adding 55 model components to the UV plane model.
! The established model now contains 236 components and 0.0389897 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.036998Jy  sigma=0.024268
! Fit after  self-cal, rms=0.037454Jy  sigma=0.024246
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -2.17652e-05 Jy
! Component: 100  -  total flux cleaned = -5.84059e-05 Jy
! Component: 150  -  total flux cleaned = -0.000275681 Jy
! Component: 200  -  total flux cleaned = -0.000551315 Jy
! Total flux subtracted in 200 components = -0.000551315 Jy
! Clean residual min=-0.000697 max=0.000699 Jy/beam
! Clean residual mean=-0.000004 rms=0.000210 Jy/beam
! Combined flux in latest and established models = 0.0384384 Jy
! Performing phase self-cal
! Adding 70 model components to the UV plane model.
! The established model now contains 306 components and 0.0384384 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.037347Jy  sigma=0.024229
! Fit after  self-cal, rms=0.037418Jy  sigma=0.024218
! Inverting map 
selfcal true, true, soltime2
! Performing amp+phase self-cal over 15 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.037418Jy  sigma=0.024218
! Fit after  self-cal, rms=0.039125Jy  sigma=0.024194
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=6.393 mas, bmaj=12.75 mas, bpa=78.08 degrees
! Estimated noise=65.9287 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.000207491 Jy
! Component: 100  -  total flux cleaned = 0.000473044 Jy
! Component: 150  -  total flux cleaned = 0.000347505 Jy
! Component: 200  -  total flux cleaned = -0.000605763 Jy
! Total flux subtracted in 200 components = -0.000605763 Jy
! Clean residual min=-0.000818 max=0.000621 Jy/beam
! Clean residual mean=-0.000012 rms=0.000218 Jy/beam
! Combined flux in latest and established models = 0.0378326 Jy
selfcal
! Performing phase self-cal
! Adding 44 model components to the UV plane model.
! The established model now contains 346 components and 0.0378326 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.039026Jy  sigma=0.024187
! Fit after  self-cal, rms=0.039139Jy  sigma=0.024179
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -5.39594e-05 Jy
! Component: 100  -  total flux cleaned = 0.000345414 Jy
! Component: 150  -  total flux cleaned = 0.00143488 Jy
! Component: 200  -  total flux cleaned = 0.0035709 Jy
! Total flux subtracted in 200 components = 0.0035709 Jy
! Clean residual min=-0.001580 max=0.001903 Jy/beam
! Clean residual mean=0.000018 rms=0.000479 Jy/beam
! Combined flux in latest and established models = 0.0414035 Jy
! Performing phase self-cal
! Adding 73 model components to the UV plane model.
! The established model now contains 415 components and 0.0414035 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.039096Jy  sigma=0.024179
! Fit after  self-cal, rms=0.039105Jy  sigma=0.024172
! Inverting map 
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 70 mega-wavelengths.
win_mult = win_mult * 1.2
selfcal true, true, soltime2
! Performing amp+phase self-cal over 15 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.039105Jy  sigma=0.024172
! Fit after  self-cal, rms=0.039917Jy  sigma=0.024159
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=6.523 mas, bmaj=12.74 mas, bpa=77.79 degrees
! Estimated noise=65.0365 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -0.000250142 Jy
! Component: 100  -  total flux cleaned = -0.000271205 Jy
! Component: 150  -  total flux cleaned = -0.000268497 Jy
! Component: 200  -  total flux cleaned = -0.000340289 Jy
! Total flux subtracted in 200 components = -0.000340289 Jy
! Clean residual min=-0.000636 max=0.000639 Jy/beam
! Clean residual mean=0.000009 rms=0.000199 Jy/beam
! Combined flux in latest and established models = 0.0410632 Jy
selfcal
! Performing phase self-cal
! Adding 58 model components to the UV plane model.
! The established model now contains 465 components and 0.0410632 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.039844Jy  sigma=0.024157
! Fit after  self-cal, rms=0.039924Jy  sigma=0.024151
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -0.000744374 Jy
! Component: 100  -  total flux cleaned = -0.00124655 Jy
! Component: 150  -  total flux cleaned = -0.00226007 Jy
! Component: 200  -  total flux cleaned = -0.00410018 Jy
! Total flux subtracted in 200 components = -0.00410018 Jy
! Clean residual min=-0.001689 max=0.001151 Jy/beam
! Clean residual mean=-0.000045 rms=0.000345 Jy/beam
! Combined flux in latest and established models = 0.036963 Jy
! Performing phase self-cal
! Adding 62 model components to the UV plane model.
! The established model now contains 525 components and 0.036963 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.039875Jy  sigma=0.024156
! Fit after  self-cal, rms=0.039918Jy  sigma=0.024152
! Inverting map 
uvtaper 0,0
! No UV-taper is currently set.
win_mult = win_mult / 1.2
print "=== Finished amplitude self-cal for VLBA stations ==="
! === Finished amplitude self-cal for VLBA stations === 
unflag *
! Unflagging all baselines in the currently selected channels.
uncalib false, false, true
! uncal: All telescope correction flags have been un-done.
integer lun
lun = outfile ( "/tmp/ff.ff" )
do i=1,nsub
  do j=1,ntel(i)
    fprintf lun, "%s\n", telname(j,i)
    end do
  end do
close ( lun )
system "/home/lpetrov/bin/dimap_selfant_process.csh /tmp/ff.ff"
![@/tmp/ff.ff]
1:BR
! Syntax error in line:
! 1:BR
! ^
! Found constant: 1.000 
! Where a command or assignment expression was expected.
![Exited script file: /tmp/ff.ff]
![Exited script file: /home/lpetrov/bin/rdv_muppet]
! 
wmap "/d2/scr/pima/rdv96_uvs/J1606+5521_X\_map.fits"
! Inverting map and beam 
! Estimated beam: bmin=5.262 mas, bmaj=5.948 mas, bpa=44.02 degrees
! Estimated noise=36.6013 mJy/beam.
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 5.262 x 5.948 at 44.02 degrees (North through East)
! Clean map  min=-0.010043  max=0.034163 Jy/beam
! Writing clean map to FITS file: /d2/scr/pima/rdv96_uvs/J1606+5521_X_map.fits
float peak_flux
peak_flux = peak(flux,max)
invert
! Inverting map 
float image_peak
image_peak = int(10000*peak_flux)/10000
float image_rms
image_rms  = int(100000*imstat(rms))/100000
print "========================================="
! ========================================= 
print "The image peak= ", image_peak, " rms= ", image_rms, " Jy"
! The image peak=  0.0341  rms=  0.00292  Jy 
quit
! Quitting program
! Log file /d2/scr/pima/rdv96_uvs/J1606+5521_X_uvs.log closed on Fri Dec 20 23:45:55 2013