! Started logfile: /d2/scr/pima/rdv96_uvs/J0642+1128_X_uvs.log on Fri Dec 20 23:44:26 2013
obs /d2/scr/pima/rdv96_uvs/J0642+1128_X_uva.fits
! Reading UV FITS file: /d2/scr/pima/rdv96_uvs/J0642+1128_X_uva.fits
! AN table 1: 44 integrations on 45 of 45 possible baselines.
! Apparent sampling: 0.866667 visibilities/baseline/integration-bin.
! Found source: J0642+1128
! 
! There are 4 IFs, and a total of 4 channels:
! 
!  IF  Channel    Frequency  Freq offset  Number of   Overall IF
!       origin    at origin  per channel   channels    bandwidth
!  ------------------------------------------------------------- (Hz)
!  01        1  8.40599e+09        8e+06          1        8e+06
!  02        2  8.47599e+09        8e+06          1        8e+06
!  03        3  8.79099e+09        8e+06          1        8e+06
!  04        4  8.89599e+09        8e+06          1        8e+06
! 
! Polarization(s): RR
! 
! Read 0 lines of history.
! 
! Reading 6864 visibilities.
select RR
! Selecting polarization: RR,  channels: 1..4
! Reading IF 1 channels: 1..1
! Reading IF 2 channels: 2..2
! Reading IF 3 channels: 3..3
! Reading IF 4 channels: 4..4
print "field_size =",field_size
! field_size = 1024 
print "field_cell =",field_cell
! field_cell = 0.2 
print "taper_size =",taper_size
! taper_size = 70 
![@/home/lpetrov/bin/rdv_muppet /d2/scr/pima/rdv96_uvs/J0642+1128_X]
integer clean_niter
clean_niter = 100
float clean_gain
clean_gain = 0.03
float dynam
dynam = 6.0
float soltime1
soltime1 = 800000
float soltime2
soltime2 = 15
float soltime3
soltime3 = 1
float thresh
thresh = 0.5
float win_mult
win_mult = 1.8
float old_peak
float new_peak
float flux_cutoff
selfant "",false
! 1:BR       self-cal  status=correctable  weight=1
! 1:FD       self-cal  status=correctable  weight=1
! 1:HN       self-cal  status=correctable  weight=1
! 1:KP       self-cal  status=correctable  weight=1
! 1:LA       self-cal  status=correctable  weight=1
! 1:MK       self-cal  status=correctable  weight=1
! 1:NL       self-cal  status=correctable  weight=1
! 1:OV       self-cal  status=correctable  weight=1
! 1:PT       self-cal  status=correctable  weight=1
! 1:SC       self-cal  status=correctable  weight=1
system "rm /tmp/ff.ff"
mapsize field_size, field_cell
! Map grid = 1024x1024 pixels with 0.200x0.200 milli-arcsec cellsize.
startmod
! Applying default point source starting model.
! Performing phase self-cal
! Adding 1 model components to the UV plane model.
! The established model now contains 1 components and 1 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=1.008379Jy  sigma=1.906166
! Fit after  self-cal, rms=0.894485Jy  sigma=1.616964
! clrmod: Cleared the established, tentative and continuum models.
! Redundant starting model cleared.
print "=== Flag out IVS stations"
! === Flag out IVS stations 
integer lun
string  cfg_file
lun = outfile ( "/tmp/ff.ff" ) 
do i=1,nsub
  do j=1,ntel(i)
    fprintf lun, "%s\n", telname(j,i)
    end do
  end do
close ( lun )
system "/home/lpetrov/bin/dimap_flag_process.csh /tmp/ff.ff"
![@/tmp/ff.ff \]
![Exited script file: /tmp/ff.ff]
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=1.334 mas, bmaj=2.27 mas, bpa=6.082 degrees
! Estimated noise=10.3407 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! Added new window around map position (0, 0).
! clean: niter=100  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.0901157 Jy
! Component: 100  -  total flux cleaned = 0.120991 Jy
! Total flux subtracted in 100 components = 0.120991 Jy
! Clean residual min=-0.006277 max=0.013717 Jy/beam
! Clean residual mean=-0.000013 rms=0.001899 Jy/beam
! Combined flux in latest and established models = 0.120991 Jy
! Performing phase self-cal
! Adding 14 model components to the UV plane model.
! The established model now contains 14 components and 0.120991 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.057981Jy  sigma=0.106207
! Fit after  self-cal, rms=0.057893Jy  sigma=0.106091
! Inverting map 
! clean: niter=100  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.0160699 Jy
! Component: 100  -  total flux cleaned = 0.0259661 Jy
! Total flux subtracted in 100 components = 0.0259661 Jy
! Clean residual min=-0.004455 max=0.005265 Jy/beam
! Clean residual mean=-0.000006 rms=0.001070 Jy/beam
! Combined flux in latest and established models = 0.146957 Jy
! Performing phase self-cal
! Adding 24 model components to the UV plane model.
! The established model now contains 35 components and 0.146957 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.053363Jy  sigma=0.089826
! Fit after  self-cal, rms=0.053437Jy  sigma=0.089791
! Inverting map 
print "=== Finished uniform weighting clean ==="
! === Finished uniform weighting clean === 
uvw 0,-1
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
win_mult = win_mult * 1.6
clean_niter = clean_niter * 2
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=1.659 mas, bmaj=2.703 mas, bpa=5.312 degrees
! Estimated noise=5.09773 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.00913854 Jy
! Component: 100  -  total flux cleaned = 0.0142557 Jy
! Component: 150  -  total flux cleaned = 0.0173379 Jy
! Component: 200  -  total flux cleaned = 0.0192628 Jy
! Total flux subtracted in 200 components = 0.0192628 Jy
! Clean residual min=-0.003348 max=0.002365 Jy/beam
! Clean residual mean=0.000003 rms=0.000746 Jy/beam
! Combined flux in latest and established models = 0.16622 Jy
! Performing phase self-cal
! Adding 64 model components to the UV plane model.
! The established model now contains 93 components and 0.16622 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.052309Jy  sigma=0.085594
! Fit after  self-cal, rms=0.052376Jy  sigma=0.085587
! Inverting map 
print "=== Finished natural weighting clean for VLBI sites ==="
! === Finished natural weighting clean for VLBI sites === 
gscale true
! Performing overall amplitude self-cal
! 
! Correcting IF 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00     FD        1.00     HN        1.03     KP        1.03     
!   LA        1.04     MK        1.20     NL        0.99     OV        0.99     
!   PT        0.98     SC        1.11     
! 
! 
! Correcting IF 2.
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.02     FD        0.99     HN        1.05     KP        0.94     
!   LA        1.03     MK        1.01     NL        0.96     OV        0.99     
!   PT        1.00     SC        1.12     
! 
! 
! Correcting IF 3.
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.06     FD        1.02     HN        1.09     KP        0.85     
!   LA        1.04     MK        0.94     NL        0.97     OV        1.04     
!   PT        0.98     SC        0.94     
! 
! 
! Correcting IF 4.
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.01     FD        1.03     HN        1.03     KP        0.90     
!   LA        1.06     MK        0.88     NL        1.00     OV        1.03     
!   PT        1.03     SC        1.04     
! 
! 
! Fit before self-cal, rms=0.052376Jy  sigma=0.085587
! Fit after  self-cal, rms=0.052893Jy  sigma=0.083533
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=1.673 mas, bmaj=2.719 mas, bpa=4.556 degrees
! Estimated noise=5.11105 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.000525746 Jy
! Component: 100  -  total flux cleaned = 0.000635746 Jy
! Component: 150  -  total flux cleaned = 0.000668324 Jy
! Component: 200  -  total flux cleaned = 0.000705831 Jy
! Total flux subtracted in 200 components = 0.000705831 Jy
! Clean residual min=-0.001700 max=0.001693 Jy/beam
! Clean residual mean=0.000000 rms=0.000422 Jy/beam
! Combined flux in latest and established models = 0.166925 Jy
! Performing phase self-cal
! Adding 19 model components to the UV plane model.
! The established model now contains 102 components and 0.166925 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.052868Jy  sigma=0.083509
! Fit after  self-cal, rms=0.052911Jy  sigma=0.083489
! Inverting map 
selfcal true, true, soltime1
! Performing amp+phase self-cal over 800000 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.052911Jy  sigma=0.083489
! Fit after  self-cal, rms=0.052715Jy  sigma=0.083480
dynam = dynam - 0.75
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=1.67 mas, bmaj=2.716 mas, bpa=4.377 degrees
! Estimated noise=5.10154 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.000230527 Jy
! Component: 100  -  total flux cleaned = 0.000302495 Jy
! Component: 150  -  total flux cleaned = 0.000367907 Jy
! Component: 200  -  total flux cleaned = 0.000395211 Jy
! Total flux subtracted in 200 components = 0.000395211 Jy
! Clean residual min=-0.001659 max=0.001658 Jy/beam
! Clean residual mean=-0.000000 rms=0.000417 Jy/beam
! Combined flux in latest and established models = 0.167321 Jy
selfcal
! Performing phase self-cal
! Adding 18 model components to the UV plane model.
! The established model now contains 104 components and 0.167321 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.052703Jy  sigma=0.083471
! Fit after  self-cal, rms=0.052711Jy  sigma=0.083471
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 3.31784e-05 Jy
! Component: 100  -  total flux cleaned = 5.44034e-05 Jy
! Component: 150  -  total flux cleaned = 5.43902e-05 Jy
! Component: 200  -  total flux cleaned = 6.06401e-05 Jy
! Total flux subtracted in 200 components = 6.06401e-05 Jy
! Clean residual min=-0.001654 max=0.001654 Jy/beam
! Clean residual mean=-0.000000 rms=0.000417 Jy/beam
! Combined flux in latest and established models = 0.167381 Jy
! Performing phase self-cal
! Adding 11 model components to the UV plane model.
! The established model now contains 108 components and 0.167381 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.052706Jy  sigma=0.083470
! Fit after  self-cal, rms=0.052708Jy  sigma=0.083470
! Inverting map 
selfcal true, true, soltime2
! Performing amp+phase self-cal over 15 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.052708Jy  sigma=0.083470
! Fit after  self-cal, rms=0.052513Jy  sigma=0.083281
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=1.665 mas, bmaj=2.717 mas, bpa=3.615 degrees
! Estimated noise=5.08906 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 3.37923e-05 Jy
! Component: 100  -  total flux cleaned = 8.49985e-05 Jy
! Component: 150  -  total flux cleaned = 0.000136596 Jy
! Component: 200  -  total flux cleaned = 0.000181087 Jy
! Total flux subtracted in 200 components = 0.000181087 Jy
! Clean residual min=-0.001470 max=0.001563 Jy/beam
! Clean residual mean=0.000000 rms=0.000379 Jy/beam
! Combined flux in latest and established models = 0.167562 Jy
selfcal
! Performing phase self-cal
! Adding 16 model components to the UV plane model.
! The established model now contains 113 components and 0.167562 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.052505Jy  sigma=0.083278
! Fit after  self-cal, rms=0.052511Jy  sigma=0.083277
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 1.92302e-05 Jy
! Component: 100  -  total flux cleaned = 3.28259e-05 Jy
! Component: 150  -  total flux cleaned = 3.8959e-05 Jy
! Component: 200  -  total flux cleaned = 4.46379e-05 Jy
! Total flux subtracted in 200 components = 4.46379e-05 Jy
! Clean residual min=-0.001462 max=0.001561 Jy/beam
! Clean residual mean=0.000000 rms=0.000379 Jy/beam
! Combined flux in latest and established models = 0.167607 Jy
! Performing phase self-cal
! Adding 10 model components to the UV plane model.
! The established model now contains 115 components and 0.167607 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.052507Jy  sigma=0.083275
! Fit after  self-cal, rms=0.052509Jy  sigma=0.083275
! Inverting map 
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 70 mega-wavelengths.
win_mult = win_mult * 1.2
selfcal true, true, soltime2
! Performing amp+phase self-cal over 15 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.052509Jy  sigma=0.083275
! Fit after  self-cal, rms=0.052391Jy  sigma=0.083274
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=2.573 mas, bmaj=3.368 mas, bpa=-6.213 degrees
! Estimated noise=4.60782 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.000128541 Jy
! Component: 100  -  total flux cleaned = 0.000141054 Jy
! Component: 150  -  total flux cleaned = 0.000146939 Jy
! Component: 200  -  total flux cleaned = 0.000157257 Jy
! Total flux subtracted in 200 components = 0.000157257 Jy
! Clean residual min=-0.001483 max=0.001494 Jy/beam
! Clean residual mean=0.000001 rms=0.000388 Jy/beam
! Combined flux in latest and established models = 0.167764 Jy
selfcal
! Performing phase self-cal
! Adding 9 model components to the UV plane model.
! The established model now contains 121 components and 0.167764 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.052390Jy  sigma=0.083271
! Fit after  self-cal, rms=0.052393Jy  sigma=0.083271
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 2.02051e-05 Jy
! Component: 100  -  total flux cleaned = 2.01284e-05 Jy
! Component: 150  -  total flux cleaned = 2.80217e-05 Jy
! Component: 200  -  total flux cleaned = 3.16815e-05 Jy
! Total flux subtracted in 200 components = 3.16815e-05 Jy
! Clean residual min=-0.001479 max=0.001489 Jy/beam
! Clean residual mean=0.000001 rms=0.000388 Jy/beam
! Combined flux in latest and established models = 0.167796 Jy
! Performing phase self-cal
! Adding 8 model components to the UV plane model.
! The established model now contains 123 components and 0.167796 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.052393Jy  sigma=0.083270
! Fit after  self-cal, rms=0.052395Jy  sigma=0.083270
! Inverting map 
uvtaper 0,0
! No UV-taper is currently set.
win_mult = win_mult / 1.2
print "=== Finished amplitude self-cal for VLBA stations ==="
! === Finished amplitude self-cal for VLBA stations === 
unflag *
! Unflagging all baselines in the currently selected channels.
uncalib false, false, true
! uncal: All telescope correction flags have been un-done.
integer lun
lun = outfile ( "/tmp/ff.ff" )
do i=1,nsub
  do j=1,ntel(i)
    fprintf lun, "%s\n", telname(j,i)
    end do
  end do
close ( lun )
system "/home/lpetrov/bin/dimap_selfant_process.csh /tmp/ff.ff"
![@/tmp/ff.ff]
1:BR
! Syntax error in line:
! 1:BR
! ^
! Found constant: 1.000 
! Where a command or assignment expression was expected.
![Exited script file: /tmp/ff.ff]
![Exited script file: /home/lpetrov/bin/rdv_muppet]
! 
wmap "/d2/scr/pima/rdv96_uvs/J0642+1128_X\_map.fits"
! Inverting map and beam 
! Estimated beam: bmin=1.664 mas, bmaj=2.715 mas, bpa=3.477 degrees
! Estimated noise=5.08199 mJy/beam.
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 1.664 x 2.715 at 3.477 degrees (North through East)
! Clean map  min=-0.0013936  max=0.12356 Jy/beam
! Writing clean map to FITS file: /d2/scr/pima/rdv96_uvs/J0642+1128_X_map.fits
float peak_flux
peak_flux = peak(flux,max)
invert
! Inverting map 
float image_peak
image_peak = int(10000*peak_flux)/10000
float image_rms
image_rms  = int(100000*imstat(rms))/100000
print "========================================="
! ========================================= 
print "The image peak= ", image_peak, " rms= ", image_rms, " Jy"
! The image peak=  0.1235  rms=  0.00037  Jy 
quit
! Quitting program
! Log file /d2/scr/pima/rdv96_uvs/J0642+1128_X_uvs.log closed on Fri Dec 20 23:44:28 2013