! Started logfile: /scr/pima/rdv96_uvs/J0642+1128_S_uvs.log on Sat Dec 21 00:22:46 2013
obs /scr/pima/rdv96_uvs/J0642+1128_S_uva.fits
! Reading UV FITS file: /scr/pima/rdv96_uvs/J0642+1128_S_uva.fits
! AN table 1: 22 integrations on 10 of 10 possible baselines.
! AN table 2: 22 integrations on 21 of 21 possible baselines.
! AN table 3: 22 integrations on 1 of 1 possible baselines.
! Apparent sampling: 0.6875 visibilities/baseline/integration-bin.
! Found source: J0642+1128
! 
! There are 4 IFs, and a total of 4 channels:
! 
!  IF  Channel    Frequency  Freq offset  Number of   Overall IF
!       origin    at origin  per channel   channels    bandwidth
!  ------------------------------------------------------------- (Hz)
!  01        1  2.23299e+09        8e+06          1        8e+06
!  02        2  2.26299e+09        8e+06          1        8e+06
!  03        3  2.35299e+09        8e+06          1        8e+06
!  04        4  2.37299e+09        8e+06          1        8e+06
! 
! Polarization(s): RR
! 
! Read 0 lines of history.
! 
! Reading 1936 visibilities.
select RR
! Selecting polarization: RR,  channels: 1..4
! Reading IF 1 channels: 1..1
! Reading IF 2 channels: 2..2
! Reading IF 3 channels: 3..3
! Reading IF 4 channels: 4..4
print "field_size =",field_size
! field_size = 1024 
print "field_cell =",field_cell
! field_cell = 0.4 
print "taper_size =",taper_size
! taper_size = 20 
![@/home/lpetrov/bin/rdv_muppet /scr/pima/rdv96_uvs/J0642+1128_S]
integer clean_niter
clean_niter = 100
float clean_gain
clean_gain = 0.03
float dynam
dynam = 6.0
float soltime1
soltime1 = 800000
float soltime2
soltime2 = 15
float soltime3
soltime3 = 1
float thresh
thresh = 0.5
float win_mult
win_mult = 1.8
float old_peak
float new_peak
float flux_cutoff
selfant "",false
! 1:FD       self-cal  status=correctable  weight=1
! 1:KP       self-cal  status=correctable  weight=1
! 1:LA       self-cal  status=correctable  weight=1
! 1:OV       self-cal  status=correctable  weight=1
! 1:PT       self-cal  status=correctable  weight=1
! 2:BR       self-cal  status=correctable  weight=1
! 2:FD       self-cal  status=correctable  weight=1
! 2:KP       self-cal  status=correctable  weight=1
! 2:LA       self-cal  status=correctable  weight=1
! 2:NL       self-cal  status=correctable  weight=1
! 2:OV       self-cal  status=correctable  weight=1
! 2:PT       self-cal  status=correctable  weight=1
! 3:HN       self-cal  status=correctable  weight=1
! 3:NL       self-cal  status=correctable  weight=1
system "rm /tmp/ff.ff"
mapsize field_size, field_cell
! Map grid = 1024x1024 pixels with 0.400x0.400 milli-arcsec cellsize.
startmod
! Applying default point source starting model.
! Performing phase self-cal
! Adding 1 model components to the UV plane model.
! The established model now contains 1 components and 1 Jy
! 
! Correcting IF 1.
!  A total of 44 telescope corrections were flagged in sub-array 2.
!  A total of 44 telescope corrections were flagged in sub-array 3.
! 
! Correcting IF 2.
!  A total of 44 telescope corrections were flagged in sub-array 2.
!  A total of 44 telescope corrections were flagged in sub-array 3.
! 
! Correcting IF 3.
!  A total of 44 telescope corrections were flagged in sub-array 2.
!  A total of 44 telescope corrections were flagged in sub-array 3.
! 
! Correcting IF 4.
!  A total of 44 telescope corrections were flagged in sub-array 2.
!  A total of 44 telescope corrections were flagged in sub-array 3.
! 
! Fit before self-cal, rms=0.997530Jy  sigma=1.432690
! Fit after  self-cal, rms=0.911155Jy  sigma=1.360767
! clrmod: Cleared the established, tentative and continuum models.
! Redundant starting model cleared.
print "=== Flag out IVS stations"
! === Flag out IVS stations 
integer lun
string  cfg_file
lun = outfile ( "/tmp/ff.ff" ) 
do i=1,nsub
  do j=1,ntel(i)
    fprintf lun, "%s\n", telname(j,i)
    end do
  end do
close ( lun )
system "/home/lpetrov/bin/dimap_flag_process.csh /tmp/ff.ff"
![@/tmp/ff.ff \]
![Exited script file: /tmp/ff.ff]
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=18.75 mas, bmaj=29.3 mas, bpa=32.55 degrees
! Estimated noise=17.1886 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=100  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.0762802 Jy
! Component: 100  -  total flux cleaned = 0.100784 Jy
! Total flux subtracted in 100 components = 0.100784 Jy
! Clean residual min=-0.009644 max=0.011216 Jy/beam
! Clean residual mean=-0.000123 rms=0.004111 Jy/beam
! Combined flux in latest and established models = 0.100784 Jy
! Performing phase self-cal
! Adding 31 model components to the UV plane model.
! The established model now contains 31 components and 0.100784 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.049557Jy  sigma=0.077912
! Fit after  self-cal, rms=0.049621Jy  sigma=0.077863
! Inverting map 
print "=== Finished uniform weighting clean ==="
! === Finished uniform weighting clean === 
uvw 0,-1
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
win_mult = win_mult * 1.6
clean_niter = clean_niter * 2
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=18.94 mas, bmaj=31.12 mas, bpa=26.62 degrees
! Estimated noise=12.0248 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.00702276 Jy
! Component: 100  -  total flux cleaned = 0.00452324 Jy
! Component: 150  -  total flux cleaned = 0.00366733 Jy
! Component: 200  -  total flux cleaned = 0.00581032 Jy
! Total flux subtracted in 200 components = 0.00581032 Jy
! Clean residual min=-0.003164 max=0.003162 Jy/beam
! Clean residual mean=-0.000086 rms=0.001570 Jy/beam
! Combined flux in latest and established models = 0.106594 Jy
! Performing phase self-cal
! Adding 145 model components to the UV plane model.
! The established model now contains 176 components and 0.106594 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.045925Jy  sigma=0.068488
! Fit after  self-cal, rms=0.046143Jy  sigma=0.068438
! Inverting map 
print "=== Finished natural weighting clean for VLBI sites ==="
! === Finished natural weighting clean for VLBI sites === 
gscale true
! Performing overall amplitude self-cal
! 
! Correcting IF 1.
!  Telescope amplitude corrections in sub-array 1:
!   FD        0.96     KP        1.16     LA        1.26     OV        1.18     
!   PT        0.98     
! 
!  Telescope amplitude corrections in sub-array 2:
!   BR        1.00*    FD        1.03     KP        1.12     LA        1.19     
!   NL        1.00*    OV        1.05     PT        0.97     
! 
!  Telescope amplitude corrections in sub-array 3:
!   HN        0.00*    NL        0.00*    
! 
! 
! Correcting IF 2.
!  Telescope amplitude corrections in sub-array 1:
!   FD        0.94     KP        1.16     LA        1.03     OV        1.03     
!   PT        0.94     
! 
!  Telescope amplitude corrections in sub-array 2:
!   BR        1.00*    FD        1.13     KP        1.12     LA        1.10     
!   NL        1.00*    OV        1.33     PT        0.91     
! 
!  Telescope amplitude corrections in sub-array 3:
!   HN        0.00*    NL        0.00*    
! 
! 
! Correcting IF 3.
!  Telescope amplitude corrections in sub-array 1:
!   FD        1.05     KP        0.93     LA        0.93     OV        1.15     
!   PT        0.98     
! 
!  Telescope amplitude corrections in sub-array 2:
!   BR        1.00*    FD        1.03     KP        0.92     LA        0.98     
!   NL        1.00*    OV        1.02     PT        1.00     
! 
!  Telescope amplitude corrections in sub-array 3:
!   HN        0.00*    NL        0.00*    
! 
! 
! Correcting IF 4.
!  Telescope amplitude corrections in sub-array 1:
!   FD        1.01     KP        0.88     LA        0.81     OV        0.92     
!   PT        0.86     
! 
!  Telescope amplitude corrections in sub-array 2:
!   BR        1.00*    FD        1.03     KP        0.90     LA        0.82     
!   NL        1.00*    OV        0.86     PT        0.82     
! 
!  Telescope amplitude corrections in sub-array 3:
!   HN        0.00*    NL        0.00*    
! 
! 
! Fit before self-cal, rms=0.046143Jy  sigma=0.068438
! Fit after  self-cal, rms=0.042500Jy  sigma=0.059943
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=19.2 mas, bmaj=31.09 mas, bpa=26.19 degrees
! Estimated noise=11.7374 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.00308228 Jy
! Component: 100  -  total flux cleaned = 0.00443216 Jy
! Component: 150  -  total flux cleaned = 0.00470837 Jy
! Component: 200  -  total flux cleaned = 0.0047578 Jy
! Total flux subtracted in 200 components = 0.0047578 Jy
! Clean residual min=-0.000886 max=0.000898 Jy/beam
! Clean residual mean=0.000005 rms=0.000403 Jy/beam
! Combined flux in latest and established models = 0.111352 Jy
! Performing phase self-cal
! Adding 57 model components to the UV plane model.
! The established model now contains 233 components and 0.111352 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.042089Jy  sigma=0.059558
! Fit after  self-cal, rms=0.042282Jy  sigma=0.059523
! Inverting map 
selfcal true, true, soltime1
! Performing amp+phase self-cal over 800000 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.042282Jy  sigma=0.059523
! Fit after  self-cal, rms=0.042447Jy  sigma=0.059502
dynam = dynam - 0.75
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=19.25 mas, bmaj=31.04 mas, bpa=26.2 degrees
! Estimated noise=11.7457 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.00122882 Jy
! Component: 100  -  total flux cleaned = 0.00130383 Jy
! Component: 150  -  total flux cleaned = 0.00101473 Jy
! Component: 200  -  total flux cleaned = 0.000750696 Jy
! Total flux subtracted in 200 components = 0.000750696 Jy
! Clean residual min=-0.000531 max=0.000530 Jy/beam
! Clean residual mean=0.000003 rms=0.000238 Jy/beam
! Combined flux in latest and established models = 0.112103 Jy
selfcal
! Performing phase self-cal
! Adding 56 model components to the UV plane model.
! The established model now contains 286 components and 0.112103 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.042340Jy  sigma=0.059414
! Fit after  self-cal, rms=0.042373Jy  sigma=0.059413
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.000121712 Jy
! Component: 100  -  total flux cleaned = 0.000424459 Jy
! Component: 150  -  total flux cleaned = 0.000675725 Jy
! Component: 200  -  total flux cleaned = 0.000770344 Jy
! Total flux subtracted in 200 components = 0.000770344 Jy
! Clean residual min=-0.000379 max=0.000381 Jy/beam
! Clean residual mean=0.000003 rms=0.000173 Jy/beam
! Combined flux in latest and established models = 0.112873 Jy
! Performing phase self-cal
! Adding 80 model components to the UV plane model.
! The established model now contains 356 components and 0.112873 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.042330Jy  sigma=0.059380
! Fit after  self-cal, rms=0.042337Jy  sigma=0.059380
! Inverting map 
selfcal true, true, soltime2
! Performing amp+phase self-cal over 15 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.042337Jy  sigma=0.059380
! Fit after  self-cal, rms=0.042366Jy  sigma=0.059375
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=19.27 mas, bmaj=31.02 mas, bpa=26.3 degrees
! Estimated noise=11.7377 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.000270761 Jy
! Component: 100  -  total flux cleaned = 0.000228497 Jy
! Component: 150  -  total flux cleaned = 0.000103893 Jy
! Component: 200  -  total flux cleaned = 3.46767e-06 Jy
! Total flux subtracted in 200 components = 3.46767e-06 Jy
! Clean residual min=-0.000330 max=0.000327 Jy/beam
! Clean residual mean=0.000002 rms=0.000140 Jy/beam
! Combined flux in latest and established models = 0.112876 Jy
selfcal
! Performing phase self-cal
! Adding 51 model components to the UV plane model.
! The established model now contains 399 components and 0.112876 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.042338Jy  sigma=0.059354
! Fit after  self-cal, rms=0.042344Jy  sigma=0.059354
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -6.31941e-05 Jy
! Component: 100  -  total flux cleaned = -9.41808e-06 Jy
! Component: 150  -  total flux cleaned = 7.27983e-05 Jy
! Component: 200  -  total flux cleaned = 0.000152 Jy
! Total flux subtracted in 200 components = 0.000152 Jy
! Clean residual min=-0.000260 max=0.000260 Jy/beam
! Clean residual mean=0.000001 rms=0.000116 Jy/beam
! Combined flux in latest and established models = 0.113028 Jy
! Performing phase self-cal
! Adding 70 model components to the UV plane model.
! The established model now contains 453 components and 0.113028 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.042324Jy  sigma=0.059342
! Fit after  self-cal, rms=0.042326Jy  sigma=0.059341
! Inverting map 
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 20 mega-wavelengths.
win_mult = win_mult * 1.2
selfcal true, true, soltime2
! Performing amp+phase self-cal over 15 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.042326Jy  sigma=0.059341
! Fit after  self-cal, rms=0.042299Jy  sigma=0.059340
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=19.75 mas, bmaj=31.05 mas, bpa=26.4 degrees
! Estimated noise=11.5304 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.000206734 Jy
! Component: 100  -  total flux cleaned = 0.000236913 Jy
! Component: 150  -  total flux cleaned = 0.000164902 Jy
! Component: 200  -  total flux cleaned = 0.00013695 Jy
! Total flux subtracted in 200 components = 0.00013695 Jy
! Clean residual min=-0.000229 max=0.000231 Jy/beam
! Clean residual mean=0.000002 rms=0.000097 Jy/beam
! Combined flux in latest and established models = 0.113165 Jy
selfcal
! Performing phase self-cal
! Adding 53 model components to the UV plane model.
! The established model now contains 491 components and 0.113165 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.042285Jy  sigma=0.059329
! Fit after  self-cal, rms=0.042287Jy  sigma=0.059329
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -0.00010157 Jy
! Component: 100  -  total flux cleaned = -8.92627e-05 Jy
! Component: 150  -  total flux cleaned = -6.57149e-05 Jy
! Component: 200  -  total flux cleaned = -0.000100696 Jy
! Total flux subtracted in 200 components = -0.000100696 Jy
! Clean residual min=-0.000192 max=0.000192 Jy/beam
! Clean residual mean=0.000000 rms=0.000085 Jy/beam
! Combined flux in latest and established models = 0.113065 Jy
! Performing phase self-cal
! Adding 64 model components to the UV plane model.
! The established model now contains 539 components and 0.113065 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.042276Jy  sigma=0.059322
! Fit after  self-cal, rms=0.042278Jy  sigma=0.059322
! Inverting map 
uvtaper 0,0
! No UV-taper is currently set.
win_mult = win_mult / 1.2
print "=== Finished amplitude self-cal for VLBA stations ==="
! === Finished amplitude self-cal for VLBA stations === 
unflag *
! Unflagging all baselines in the currently selected channels.
uncalib false, false, true
! uncal: All telescope correction flags have been un-done.
integer lun
lun = outfile ( "/tmp/ff.ff" )
do i=1,nsub
  do j=1,ntel(i)
    fprintf lun, "%s\n", telname(j,i)
    end do
  end do
close ( lun )
system "/home/lpetrov/bin/dimap_selfant_process.csh /tmp/ff.ff"
![@/tmp/ff.ff]
1:FD
! Syntax error in line:
! 1:FD
! ^
! Found constant: 1.000 
! Where a command or assignment expression was expected.
![Exited script file: /tmp/ff.ff]
![Exited script file: /home/lpetrov/bin/rdv_muppet]
! 
wmap "/scr/pima/rdv96_uvs/J0642+1128_S\_map.fits"
! Inverting map and beam 
! Estimated beam: bmin=19.11 mas, bmaj=27.72 mas, bpa=25.5 degrees
! Estimated noise=12.0418 mJy/beam.
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 19.11 x 27.72 at 25.5 degrees (North through East)
! Clean map  min=-0.0049184  max=0.090031 Jy/beam
! Writing clean map to FITS file: /scr/pima/rdv96_uvs/J0642+1128_S_map.fits
float peak_flux
peak_flux = peak(flux,max)
invert
! Inverting map 
float image_peak
image_peak = int(10000*peak_flux)/10000
float image_rms
image_rms  = int(100000*imstat(rms))/100000
print "========================================="
! ========================================= 
print "The image peak= ", image_peak, " rms= ", image_rms, " Jy"
! The image peak=  0.09  rms=  0.00155  Jy 
quit
! Quitting program
! Log file /scr/pima/rdv96_uvs/J0642+1128_S_uvs.log closed on Sat Dec 21 00:22:50 2013