! Started logfile: J1608+1029_S_2003_07_09_pus_uvs.log on Mon Apr  8 11:27:29 2013
obs J1608+1029_S_2003_07_09_pus_uva.fits
! Reading UV FITS file: J1608+1029_S_2003_07_09_pus_uva.fits
! AN table 1: 44 integrations on 171 of 171 possible baselines.
! AN table 2: 70 integrations on 171 of 171 possible baselines.
! AN table 3: 83 integrations on 171 of 171 possible baselines.
! AN table 4: 66 integrations on 171 of 171 possible baselines.
! AN table 5: 75 integrations on 171 of 171 possible baselines.
! AN table 6: 106 integrations on 171 of 171 possible baselines.
! Apparent sampling: 0.0847163 visibilities/baseline/integration-bin.
! *** This seems a bit low - see "help observe" on the binwid argument.
! Found source: J1608+1029
! Warning: Unknown AN-table MNTSTA value (3).
!          Will assume that it is ground-based.
! Warning: Unknown AN-table MNTSTA value (3).
!          Will assume that it is ground-based.
! Warning: Unknown AN-table MNTSTA value (3).
!          Will assume that it is ground-based.
! Warning: Unknown AN-table MNTSTA value (3).
!          Will assume that it is ground-based.
! Warning: Unknown AN-table MNTSTA value (3).
!          Will assume that it is ground-based.
! Warning: Unknown AN-table MNTSTA value (3).
!          Will assume that it is ground-based.
! 
! There are 4 IFs, and a total of 4 channels:
! 
!  IF  Channel    Frequency  Freq offset  Number of   Overall IF
!       origin    at origin  per channel   channels    bandwidth
!  ------------------------------------------------------------- (Hz)
!  01        1  2.23697e+09        8e+06          1        8e+06
!  02        2  2.26697e+09        8e+06          1        8e+06
!  03        3  2.35697e+09        8e+06          1        8e+06
!  04        4  2.37697e+09        8e+06          1        8e+06
! 
! Polarization(s): RR
! 
! Read 1520 lines of history.
! 
! Reading 25728 visibilities.
select I
! Polarization I is unavailable.
! Selecting polarization: RR,  channels: 1..4
! Reading IF 1 channels: 1..1
! Reading IF 2 channels: 2..2
! Reading IF 3 channels: 3..3
! Reading IF 4 channels: 4..4
print "field_size =",field_size
! field_size = 512 
print "field_cell =",field_cell
! field_cell = 0.5 
print "taper_size =",taper_size
! taper_size = 20 
![@muppet J1608+1029_S_2003_07_09_pus]
integer clean_niter
clean_niter = 100
float clean_gain
clean_gain = 0.03
float dynam
dynam = 6.0
float soltime1
soltime1 = 120
float soltime2
soltime2 = 20
float thresh
thresh = 0.5
float win_mult
win_mult = 1.8
float time_av
time_av = 16
float old_peak
float new_peak
float flux_cutoff
mapsize field_size, field_cell
! Map grid = 512x512 pixels with 0.500x0.500 milli-arcsec cellsize.
startmod
! Applying default point source starting model.
! Performing phase self-cal
! Adding 1 model components to the UV plane model.
! The established model now contains 1 components and 1 Jy
! 
! Correcting IF 1.
!  A total of 815 telescope corrections were flagged in sub-array 1.
!  A total of 942 telescope corrections were flagged in sub-array 2.
!  A total of 1528 telescope corrections were flagged in sub-array 3.
!  A total of 1101 telescope corrections were flagged in sub-array 4.
!  A total of 1209 telescope corrections were flagged in sub-array 5.
!  A total of 1166 telescope corrections were flagged in sub-array 6.
! 
! Correcting IF 2.
!  A total of 815 telescope corrections were flagged in sub-array 1.
!  A total of 942 telescope corrections were flagged in sub-array 2.
!  A total of 1529 telescope corrections were flagged in sub-array 3.
!  A total of 1110 telescope corrections were flagged in sub-array 4.
!  A total of 1198 telescope corrections were flagged in sub-array 5.
!  A total of 1166 telescope corrections were flagged in sub-array 6.
! 
! Correcting IF 3.
!  A total of 815 telescope corrections were flagged in sub-array 1.
!  A total of 942 telescope corrections were flagged in sub-array 2.
!  A total of 1426 telescope corrections were flagged in sub-array 3.
!  A total of 1139 telescope corrections were flagged in sub-array 4.
!  A total of 1187 telescope corrections were flagged in sub-array 5.
!  A total of 1166 telescope corrections were flagged in sub-array 6.
! 
! Correcting IF 4.
!  A total of 818 telescope corrections were flagged in sub-array 1.
!  A total of 942 telescope corrections were flagged in sub-array 2.
!  A total of 1429 telescope corrections were flagged in sub-array 3.
!  A total of 1140 telescope corrections were flagged in sub-array 4.
!  A total of 1201 telescope corrections were flagged in sub-array 5.
!  A total of 1206 telescope corrections were flagged in sub-array 6.
! 
! Fit before self-cal, rms=1.690601Jy  sigma=0.013186
! Fit after  self-cal, rms=1.217529Jy  sigma=0.009914
! clrmod: Cleared the established, tentative and continuum models.
! Redundant starting model cleared.
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=2.2 mas, bmaj=4.859 mas, bpa=-4.289 degrees
! Estimated noise=1045.74 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! Added new window around map position (0, 0).
! clean: niter=100  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 1.46928 Jy
! Component: 100  -  total flux cleaned = 1.89791 Jy
! Total flux subtracted in 100 components = 1.89791 Jy
! Clean residual min=-0.053161 max=0.180277 Jy/beam
! Clean residual mean=0.000521 rms=0.016533 Jy/beam
! Combined flux in latest and established models = 1.89791 Jy
! Performing phase self-cal
! Adding 5 model components to the UV plane model.
! The established model now contains 5 components and 1.89791 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.592020Jy  sigma=0.004661
! Fit after  self-cal, rms=0.591697Jy  sigma=0.004660
! Inverting map 
! clean: niter=100  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.185508 Jy
! Component: 100  -  total flux cleaned = 0.274349 Jy
! Total flux subtracted in 100 components = 0.274349 Jy
! Clean residual min=-0.046562 max=0.054357 Jy/beam
! Clean residual mean=0.000078 rms=0.012768 Jy/beam
! Combined flux in latest and established models = 2.17226 Jy
! Performing phase self-cal
! Adding 14 model components to the UV plane model.
! The established model now contains 16 components and 2.17226 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.512840Jy  sigma=0.003969
! Fit after  self-cal, rms=0.512310Jy  sigma=0.003966
! Inverting map 
print "************** FINISHED UNIFORM WEIGHTING CLEAN **************"
! ************** FINISHED UNIFORM WEIGHTING CLEAN ************** 
! 
uvw 0,-1
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
win_mult = win_mult * 1.6
clean_niter = clean_niter * 2
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=2.919 mas, bmaj=6.144 mas, bpa=-8.169 degrees
! Estimated noise=596.654 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.100139 Jy
! Component: 100  -  total flux cleaned = 0.154021 Jy
! Component: 150  -  total flux cleaned = 0.185291 Jy
! Component: 200  -  total flux cleaned = 0.203821 Jy
! Total flux subtracted in 200 components = 0.203821 Jy
! Clean residual min=-0.046415 max=0.045405 Jy/beam
! Clean residual mean=-0.000212 rms=0.014353 Jy/beam
! Combined flux in latest and established models = 2.37608 Jy
! Performing phase self-cal
! Adding 20 model components to the UV plane model.
! The established model now contains 34 components and 2.37608 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.495241Jy  sigma=0.003812
! Fit after  self-cal, rms=0.495102Jy  sigma=0.003810
! Inverting map 
print "************** FINISHED NATURAL WEIGHTING CLEAN **************"
! ************** FINISHED NATURAL WEIGHTING CLEAN ************** 
! 
gscale true
! Performing overall amplitude self-cal
! 
! Correcting IF 1.
!  A total of 21 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.00*    FD        0.00*    GC        0.00*    GG        0.00*    
!   HN        0.00*    KP        0.00*    LA        0.00*    MA        0.00*    
!   MK        0.00*    NL        0.00*    NY        0.00*    ON        0.00*    
!   OV        0.00*    PT        0.00*    SC        0.00*    TC        0.00*    
!   TS        0.00*    WF        0.00*    WZ        0.00*    
! 
!  A total of 33 telescope corrections were flagged in sub-array 2.
!  Telescope amplitude corrections in sub-array 2:
!   BR        1.09     FD        1.19     GC        0.96     GG        1.00*    
!   HN        1.04     KP        0.87     LA        1.19     MA        1.00*    
!   MK        1.00     NL        1.01     NY        1.00*    ON        1.00*    
!   OV        0.84     PT        1.07     SC        1.00*    TC        1.00*    
!   TS        1.02     WF        1.02     WZ        1.00*    
! 
!  A total of 12 telescope corrections were flagged in sub-array 3.
!  Telescope amplitude corrections in sub-array 3:
!   BR        1.00*    FD        1.00*    GC        1.00*    GG        1.00*    
!   HN        0.89     KP        1.00*    LA        1.00*    MA        1.25     
!   MK        1.00*    NL        1.00*    NY        1.10     ON        1.32     
!   OV        1.00*    PT        1.00*    SC        1.00*    TC        1.00*    
!   TS        1.00*    WF        1.00*    WZ        0.99     
! 
!  A total of 36 telescope corrections were flagged in sub-array 4.
!  Telescope amplitude corrections in sub-array 4:
!   BR        1.02     FD        1.25     GC        1.00*    GG        1.00*    
!   HN        0.93     KP        0.98     LA        1.21     MA        0.98     
!   MK        1.00*    NL        1.01     NY        1.14     ON        1.25     
!   OV        1.12     PT        1.08     SC        0.80     TC        1.00*    
!   TS        1.00*    WF        1.00*    WZ        0.96     
! 
!  A total of 180 telescope corrections were flagged in sub-array 5.
!  Telescope amplitude corrections in sub-array 5:
!   BR        1.00*    FD        1.00*    GC        1.00*    GG        1.00*    
!   HN        1.00*    KP        1.00*    LA        1.00*    MA        1.44     
!   MK        1.00*    NL        1.00*    NY        1.40     ON        1.24     
!   OV        1.00*    PT        1.00*    SC        1.00*    TC        1.00*    
!   TS        1.23     WF        1.00*    WZ        1.19     
! 
!  A total of 18 telescope corrections were flagged in sub-array 6.
!  Telescope amplitude corrections in sub-array 6:
!   BR        1.00     FD        1.18     GC        1.03     GG        1.00*    
!   HN        1.00     KP        0.92     LA        1.15     MA        1.00*    
!   MK        1.07     NL        1.01     NY        1.18     ON        1.23     
!   OV        0.88     PT        1.01     SC        0.84     TC        1.00*    
!   TS        1.00*    WF        0.92     WZ        1.00*    
! 
! 
! Correcting IF 2.
!  A total of 21 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.00*    FD        0.00*    GC        0.00*    GG        0.00*    
!   HN        0.00*    KP        0.00*    LA        0.00*    MA        0.00*    
!   MK        0.00*    NL        0.00*    NY        0.00*    ON        0.00*    
!   OV        0.00*    PT        0.00*    SC        0.00*    TC        0.00*    
!   TS        0.00*    WF        0.00*    WZ        0.00*    
! 
!  A total of 33 telescope corrections were flagged in sub-array 2.
!  Telescope amplitude corrections in sub-array 2:
!   BR        1.15     FD        1.11     GC        0.87     GG        1.00*    
!   HN        1.05     KP        0.97     LA        1.13     MA        1.00*    
!   MK        1.00     NL        1.05     NY        1.00*    ON        1.00*    
!   OV        0.96     PT        1.05     SC        1.00*    TC        1.00*    
!   TS        1.03     WF        0.96     WZ        1.00*    
! 
!  A total of 12 telescope corrections were flagged in sub-array 3.
!  Telescope amplitude corrections in sub-array 3:
!   BR        1.00*    FD        1.00*    GC        1.00*    GG        1.00*    
!   HN        0.91     KP        1.00*    LA        1.00*    MA        1.00*    
!   MK        1.00*    NL        1.00*    NY        0.86     ON        1.12     
!   OV        1.00*    PT        1.00*    SC        1.00*    TC        1.00*    
!   TS        1.00*    WF        1.00*    WZ        1.01     
! 
!  A total of 63 telescope corrections were flagged in sub-array 4.
!  Telescope amplitude corrections in sub-array 4:
!   BR        1.09     FD        1.17     GC        1.00*    GG        1.00*    
!   HN        1.01     KP        1.06     LA        1.16     MA        1.00*    
!   MK        1.00*    NL        1.04     NY        1.00*    ON        1.00*    
!   OV        1.12     PT        1.08     SC        0.83     TC        1.00*    
!   TS        1.00*    WF        1.00*    WZ        1.00*    
! 
!  A total of 195 telescope corrections were flagged in sub-array 5.
!  Telescope amplitude corrections in sub-array 5:
!   BR        1.00*    FD        1.00*    GC        1.00*    GG        1.00*    
!   HN        1.00*    KP        1.00*    LA        1.00*    MA        1.00*    
!   MK        1.00*    NL        1.00*    NY        0.85     ON        1.01     
!   OV        1.00*    PT        1.00*    SC        1.00*    TC        1.00*    
!   TS        1.09     WF        1.00*    WZ        0.90     
! 
!  A total of 18 telescope corrections were flagged in sub-array 6.
!  Telescope amplitude corrections in sub-array 6:
!   BR        1.10     FD        1.08     GC        0.93     GG        1.00*    
!   HN        1.03     KP        1.00     LA        1.09     MA        1.00*    
!   MK        1.06     NL        1.04     NY        0.90     ON        1.07     
!   OV        0.96     PT        0.99     SC        0.86     TC        1.00*    
!   TS        1.00*    WF        0.88     WZ        1.00*    
! 
! 
! Correcting IF 3.
!  A total of 21 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.00*    FD        0.00*    GC        0.00*    GG        0.00*    
!   HN        0.00*    KP        0.00*    LA        0.00*    MA        0.00*    
!   MK        0.00*    NL        0.00*    NY        0.00*    ON        0.00*    
!   OV        0.00*    PT        0.00*    SC        0.00*    TC        0.00*    
!   TS        0.00*    WF        0.00*    WZ        0.00*    
! 
!  A total of 33 telescope corrections were flagged in sub-array 2.
!  Telescope amplitude corrections in sub-array 2:
!   BR        1.34     FD        1.05     GC        1.08     GG        1.00*    
!   HN        1.03     KP        0.98     LA        0.93     MA        1.00*    
!   MK        0.98     NL        1.10     NY        1.00*    ON        1.00*    
!   OV        0.95     PT        1.09     SC        1.00*    TC        1.00*    
!   TS        1.06     WF        0.82     WZ        1.00*    
! 
!  A total of 90 telescope corrections were flagged in sub-array 3.
!  Telescope amplitude corrections in sub-array 3:
!   BR        1.00*    FD        1.00*    GC        1.00*    GG        1.00*    
!   HN        0.91     KP        1.00*    LA        1.00*    MA        1.08     
!   MK        1.00*    NL        1.00*    NY        0.79     ON        1.37     
!   OV        1.00*    PT        1.00*    SC        1.00*    TC        1.00*    
!   TS        1.00*    WF        1.00*    WZ        1.01     
! 
!  A total of 30 telescope corrections were flagged in sub-array 4.
!  Telescope amplitude corrections in sub-array 4:
!   BR        1.56     FD        1.13     GC        1.00*    GG        1.00*    
!   HN        1.02     KP        1.03     LA        0.95     MA        1.01     
!   MK        1.00*    NL        1.07     NY        0.89     ON        1.70     
!   OV        1.09     PT        1.11     SC        0.94     TC        1.00*    
!   TS        1.00*    WF        1.00*    WZ        1.03     
! 
!  A total of 54 telescope corrections were flagged in sub-array 5.
!  Telescope amplitude corrections in sub-array 5:
!   BR        1.00*    FD        1.00*    GC        1.00*    GG        1.00*    
!   HN        1.00*    KP        1.00*    LA        1.00*    MA        0.97     
!   MK        1.00*    NL        1.00*    NY        0.92     ON        1.44     
!   OV        1.00*    PT        1.00*    SC        1.00*    TC        1.00*    
!   TS        1.00*    WF        1.00*    WZ        1.31     
! 
!  A total of 18 telescope corrections were flagged in sub-array 6.
!  Telescope amplitude corrections in sub-array 6:
!   BR        1.11     FD        1.01     GC        1.14     GG        1.00*    
!   HN        1.03     KP        0.99     LA        0.92     MA        1.00*    
!   MK        1.02     NL        1.09     NY        0.87     ON        1.28     
!   OV        0.88     PT        1.04     SC        0.96     TC        1.00*    
!   TS        1.00*    WF        0.91     WZ        1.00*    
! 
! 
! Correcting IF 4.
!  A total of 18 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.00*    FD        0.00*    GC        0.00*    GG        0.00*    
!   HN        0.00*    KP        0.00*    LA        0.00*    MA        0.00*    
!   MK        0.00*    NL        0.00*    NY        0.00*    ON        0.00*    
!   OV        0.00*    PT        0.00*    SC        0.00*    TC        0.00*    
!   TS        0.00*    WF        0.00*    WZ        0.00*    
! 
!  A total of 33 telescope corrections were flagged in sub-array 2.
!  Telescope amplitude corrections in sub-array 2:
!   BR        1.15     FD        0.94     GC        1.10     GG        1.00*    
!   HN        1.06     KP        0.97     LA        0.75     MA        1.00*    
!   MK        0.93     NL        1.02     NY        1.00*    ON        1.00*    
!   OV        0.76     PT        1.06     SC        1.00*    TC        1.00*    
!   TS        1.04     WF        0.89     WZ        1.00*    
! 
!  A total of 87 telescope corrections were flagged in sub-array 3.
!  Telescope amplitude corrections in sub-array 3:
!   BR        1.00*    FD        1.00*    GC        1.00*    GG        1.00*    
!   HN        0.87     KP        1.00*    LA        1.00*    MA        1.10     
!   MK        1.00*    NL        1.00*    NY        0.73     ON        1.37     
!   OV        1.00*    PT        1.00*    SC        1.00*    TC        1.00*    
!   TS        1.00*    WF        1.00*    WZ        1.03     
! 
!  A total of 33 telescope corrections were flagged in sub-array 4.
!  Telescope amplitude corrections in sub-array 4:
!   BR        0.56     FD        0.95     GC        1.00*    GG        1.00*    
!   HN        0.92     KP        1.04     LA        0.79     MA        1.00*    
!   MK        1.00*    NL        1.01     NY        1.00*    ON        1.00*    
!   OV        0.95     PT        1.06     SC        0.97     TC        1.00*    
!   TS        1.00*    WF        1.00*    WZ        1.00*    
! 
!  A total of 72 telescope corrections were flagged in sub-array 5.
!  Telescope amplitude corrections in sub-array 5:
!   BR        1.00*    FD        1.00*    GC        1.00*    GG        1.00*    
!   HN        1.00*    KP        1.00*    LA        1.00*    MA        0.96     
!   MK        1.00*    NL        1.00*    NY        0.83     ON        1.46     
!   OV        1.00*    PT        1.00*    SC        1.00*    TC        1.00*    
!   TS        1.00*    WF        1.00*    WZ        1.31     
! 
!  A total of 24 telescope corrections were flagged in sub-array 6.
!  Telescope amplitude corrections in sub-array 6:
!   BR        0.98     FD        0.93     GC        1.16     GG        1.00*    
!   HN        1.06     KP        0.99     LA        0.75     MA        1.00*    
!   MK        0.95     NL        1.01     NY        0.83     ON        1.25     
!   OV        0.72     PT        0.99     SC        1.00     TC        1.00*    
!   TS        1.00*    WF        0.87     WZ        1.00*    
! 
! 
! Fit before self-cal, rms=0.495102Jy  sigma=0.003810
! Fit after  self-cal, rms=0.300337Jy  sigma=0.002215
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=2.942 mas, bmaj=6.233 mas, bpa=-8.682 degrees
! Estimated noise=598.51 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -0.00328948 Jy
! Component: 100  -  total flux cleaned = -0.00489939 Jy
! Component: 150  -  total flux cleaned = -0.00718565 Jy
! Component: 200  -  total flux cleaned = -0.00828265 Jy
! Total flux subtracted in 200 components = -0.00828265 Jy
! Clean residual min=-0.023105 max=0.022310 Jy/beam
! Clean residual mean=-0.000261 rms=0.006466 Jy/beam
! Combined flux in latest and established models = 2.36779 Jy
! Performing phase self-cal
! Adding 13 model components to the UV plane model.
! The established model now contains 40 components and 2.36779 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.299079Jy  sigma=0.002208
! Fit after  self-cal, rms=0.298987Jy  sigma=0.002206
! Inverting map 
selfcal true, true, soltime1
! Performing amp+phase self-cal over 120 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.298987Jy  sigma=0.002206
! Fit after  self-cal, rms=0.299262Jy  sigma=0.002060
dynam = dynam - 0.75
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=2.945 mas, bmaj=6.248 mas, bpa=-8.717 degrees
! Estimated noise=604.625 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.0109026 Jy
! Component: 100  -  total flux cleaned = 0.0104039 Jy
! Component: 150  -  total flux cleaned = 0.00962299 Jy
! Component: 200  -  total flux cleaned = 0.0089877 Jy
! Total flux subtracted in 200 components = 0.0089877 Jy
! Clean residual min=-0.019796 max=0.019026 Jy/beam
! Clean residual mean=-0.000162 rms=0.005444 Jy/beam
! Combined flux in latest and established models = 2.37678 Jy
selfcal
! Performing phase self-cal
! Adding 9 model components to the UV plane model.
! The established model now contains 42 components and 2.37678 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.297177Jy  sigma=0.002047
! Fit after  self-cal, rms=0.297087Jy  sigma=0.002046
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -0.0008988 Jy
! Component: 100  -  total flux cleaned = -0.00136852 Jy
! Component: 150  -  total flux cleaned = -0.00178577 Jy
! Component: 200  -  total flux cleaned = -0.00234607 Jy
! Total flux subtracted in 200 components = -0.00234607 Jy
! Clean residual min=-0.020273 max=0.019073 Jy/beam
! Clean residual mean=-0.000154 rms=0.005457 Jy/beam
! Combined flux in latest and established models = 2.37444 Jy
! Performing phase self-cal
! Adding 11 model components to the UV plane model.
! The established model now contains 48 components and 2.37444 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.296771Jy  sigma=0.002043
! Fit after  self-cal, rms=0.296692Jy  sigma=0.002043
! Inverting map 
selfcal true, true, soltime2
! Performing amp+phase self-cal over 20 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.296692Jy  sigma=0.002043
! Fit after  self-cal, rms=0.244882Jy  sigma=0.001576
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=2.958 mas, bmaj=6.263 mas, bpa=-8.804 degrees
! Estimated noise=605.545 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -0.00686422 Jy
! Component: 100  -  total flux cleaned = -0.00775198 Jy
! Component: 150  -  total flux cleaned = -0.00847344 Jy
! Component: 200  -  total flux cleaned = -0.00906833 Jy
! Total flux subtracted in 200 components = -0.00906833 Jy
! Clean residual min=-0.008397 max=0.021422 Jy/beam
! Clean residual mean=-0.000021 rms=0.002280 Jy/beam
! Combined flux in latest and established models = 2.36537 Jy
selfcal
! Performing phase self-cal
! Adding 9 model components to the UV plane model.
! The established model now contains 50 components and 2.36537 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.244466Jy  sigma=0.001572
! Fit after  self-cal, rms=0.244463Jy  sigma=0.001572
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! Added new window around map position (-5, 6).
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.0187024 Jy
! Component: 100  -  total flux cleaned = 0.0220328 Jy
! Component: 150  -  total flux cleaned = 0.0217867 Jy
! Component: 200  -  total flux cleaned = 0.0219687 Jy
! Total flux subtracted in 200 components = 0.0219687 Jy
! Clean residual min=-0.006694 max=0.006473 Jy/beam
! Clean residual mean=-0.000121 rms=0.001661 Jy/beam
! Combined flux in latest and established models = 2.38734 Jy
! Performing phase self-cal
! Adding 18 model components to the UV plane model.
! The established model now contains 64 components and 2.38734 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.243092Jy  sigma=0.001558
! Fit after  self-cal, rms=0.242898Jy  sigma=0.001556
! Inverting map 
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 20 mega-wavelengths.
win_mult = win_mult * 1.2
selfcal true, true, soltime2
! Performing amp+phase self-cal over 20 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.242898Jy  sigma=0.001556
! Fit after  self-cal, rms=0.242982Jy  sigma=0.001554
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=7.901 mas, bmaj=10.03 mas, bpa=-22.32 degrees
! Estimated noise=723.061 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.0034775 Jy
! Component: 100  -  total flux cleaned = 0.00291664 Jy
! Component: 150  -  total flux cleaned = 0.00236584 Jy
! Component: 200  -  total flux cleaned = 0.00215507 Jy
! Total flux subtracted in 200 components = 0.00215507 Jy
! Clean residual min=-0.006935 max=0.005442 Jy/beam
! Clean residual mean=-0.000330 rms=0.001966 Jy/beam
! Combined flux in latest and established models = 2.38949 Jy
selfcal
! Performing phase self-cal
! Adding 24 model components to the UV plane model.
! The established model now contains 87 components and 2.38949 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.242827Jy  sigma=0.001551
! Fit after  self-cal, rms=0.242802Jy  sigma=0.001551
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.000968429 Jy
! Component: 100  -  total flux cleaned = 0.000976036 Jy
! Component: 150  -  total flux cleaned = 0.000832535 Jy
! Component: 200  -  total flux cleaned = 0.000774155 Jy
! Total flux subtracted in 200 components = 0.000774155 Jy
! Clean residual min=-0.006958 max=0.005401 Jy/beam
! Clean residual mean=-0.000335 rms=0.001944 Jy/beam
! Combined flux in latest and established models = 2.39027 Jy
! Performing phase self-cal
! Adding 21 model components to the UV plane model.
! The established model now contains 102 components and 2.39027 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.242771Jy  sigma=0.001551
! Fit after  self-cal, rms=0.242754Jy  sigma=0.001551
! Inverting map 
uvtaper 0,0
! No UV-taper is currently set.
win_mult = win_mult / 1.2
print "************** FINISHED AMPLITUDE SELF-CAL **************"
! ************** FINISHED AMPLITUDE SELF-CAL ************** 
restore
! Inverting map and beam 
! Estimated beam: bmin=2.96 mas, bmaj=6.274 mas, bpa=-8.77 degrees
! Estimated noise=605.927 mJy/beam.
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 2.96 x 6.274 at -8.77 degrees (North through East)
! Clean map  min=-0.0055145  max=2.047 Jy/beam
if(peak(flux) > thresh)
  selfcal true, true
  clean clean_niter,clean_gain
  selfcal
  flux_cutoff = imstat(rms) * dynam
  repeat
    if (peak(flux) > flux_cutoff) peakwin win_mult
    clean clean_niter,clean_gain
    flux_cutoff = imstat(rms) * dynam
    selfcal
    new_peak = peak(flux)
    until(new_peak<=flux_cutoff)
  selfcal true, true
  end if
! Performing amp+phase self-cal
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.242754Jy  sigma=0.001551
! Fit after  self-cal, rms=0.210617Jy  sigma=0.001268
! Inverting map and beam 
! Estimated beam: bmin=2.965 mas, bmaj=6.275 mas, bpa=-8.779 degrees
! Estimated noise=605.113 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -0.0040055 Jy
! Component: 100  -  total flux cleaned = -0.00436744 Jy
! Component: 150  -  total flux cleaned = -0.00467908 Jy
! Component: 200  -  total flux cleaned = -0.00481323 Jy
! Total flux subtracted in 200 components = -0.00481323 Jy
! Clean residual min=-0.004274 max=0.004142 Jy/beam
! Clean residual mean=-0.000057 rms=0.001077 Jy/beam
! Combined flux in latest and established models = 2.38545 Jy
! Performing phase self-cal
! Adding 16 model components to the UV plane model.
! The established model now contains 112 components and 2.38545 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.210302Jy  sigma=0.001265
! Fit after  self-cal, rms=0.210274Jy  sigma=0.001265
! Inverting map 
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.000414998 Jy
! Component: 100  -  total flux cleaned = 0.000406989 Jy
! Component: 150  -  total flux cleaned = 0.00029602 Jy
! Component: 200  -  total flux cleaned = 0.000192739 Jy
! Total flux subtracted in 200 components = 0.000192739 Jy
! Clean residual min=-0.004283 max=0.003852 Jy/beam
! Clean residual mean=-0.000058 rms=0.001053 Jy/beam
! Combined flux in latest and established models = 2.38564 Jy
! Performing phase self-cal
! Adding 14 model components to the UV plane model.
! The established model now contains 114 components and 2.38564 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.210147Jy  sigma=0.001264
! Fit after  self-cal, rms=0.210128Jy  sigma=0.001264
! Inverting map 
! Performing amp+phase self-cal
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.210128Jy  sigma=0.001264
! Fit after  self-cal, rms=0.210287Jy  sigma=0.001263
print "************** CLEARING MODEL AND STARTING OVER **********"
! ************** CLEARING MODEL AND STARTING OVER ********** 
clrmod true
! clrmod: Cleared the established and tentative models.
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=2.26 mas, bmaj=4.939 mas, bpa=-5.773 degrees
! Estimated noise=1095.94 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 1.51589 Jy
! Component: 100  -  total flux cleaned = 1.93594 Jy
! Component: 150  -  total flux cleaned = 2.11231 Jy
! Component: 200  -  total flux cleaned = 2.19188 Jy
! Total flux subtracted in 200 components = 2.19188 Jy
! Clean residual min=-0.010202 max=0.038187 Jy/beam
! Clean residual mean=0.000276 rms=0.003706 Jy/beam
! Combined flux in latest and established models = 2.19188 Jy
uvw 0,-1
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Adding 21 model components to the UV plane model.
! The established model now contains 21 components and 2.19188 Jy
! Inverting map and beam 
! Estimated beam: bmin=2.969 mas, bmaj=6.283 mas, bpa=-8.78 degrees
! Estimated noise=605.058 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  keep
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.0752226 Jy
! Component: 100  -  total flux cleaned = 0.115661 Jy
! Component: 150  -  total flux cleaned = 0.139424 Jy
! Component: 200  -  total flux cleaned = 0.154768 Jy
! Total flux subtracted in 200 components = 0.154768 Jy
! Clean residual min=-0.004540 max=0.008591 Jy/beam
! Clean residual mean=0.000124 rms=0.001635 Jy/beam
! Combined flux in latest and established models = 2.34665 Jy
! Adding 53 model components to the UV plane model.
! The established model now contains 70 components and 2.34665 Jy
! Inverting map 
! Added new window around map position (-0.5, 7).
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.0104466 Jy
! Component: 100  -  total flux cleaned = 0.0177209 Jy
! Component: 150  -  total flux cleaned = 0.0229181 Jy
! Component: 200  -  total flux cleaned = 0.0257948 Jy
! Total flux subtracted in 200 components = 0.0257948 Jy
! Clean residual min=-0.003965 max=0.003759 Jy/beam
! Clean residual mean=-0.000002 rms=0.001019 Jy/beam
! Combined flux in latest and established models = 2.37245 Jy
! Adding 38 model components to the UV plane model.
! The established model now contains 101 components and 2.37245 Jy
! Inverting map 
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 20 mega-wavelengths.
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=7.905 mas, bmaj=10.04 mas, bpa=-22.17 degrees
! Estimated noise=720.17 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.00389551 Jy
! Component: 100  -  total flux cleaned = 0.00603064 Jy
! Component: 150  -  total flux cleaned = 0.00675141 Jy
! Component: 200  -  total flux cleaned = 0.00711425 Jy
! Total flux subtracted in 200 components = 0.00711425 Jy
! Clean residual min=-0.003869 max=0.003593 Jy/beam
! Clean residual mean=-0.000086 rms=0.001054 Jy/beam
! Combined flux in latest and established models = 2.37956 Jy
flux_cutoff = imstat(rms) * dynam
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  keep
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.000306591 Jy
! Component: 100  -  total flux cleaned = 0.000429894 Jy
! Component: 150  -  total flux cleaned = 0.000492143 Jy
! Component: 200  -  total flux cleaned = 0.000528296 Jy
! Total flux subtracted in 200 components = 0.000528296 Jy
! Clean residual min=-0.003801 max=0.003618 Jy/beam
! Clean residual mean=-0.000091 rms=0.001045 Jy/beam
! Combined flux in latest and established models = 2.38009 Jy
! Adding 51 model components to the UV plane model.
! The established model now contains 141 components and 2.38009 Jy
! Inverting map 
uvtaper 0,0
! No UV-taper is currently set.
clean
! Inverting map and beam 
! Estimated beam: bmin=2.969 mas, bmaj=6.283 mas, bpa=-8.78 degrees
! Estimated noise=605.058 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -0.00112355 Jy
! Component: 100  -  total flux cleaned = -0.00127869 Jy
! Component: 150  -  total flux cleaned = -0.0012208 Jy
! Component: 200  -  total flux cleaned = -0.00098925 Jy
! Total flux subtracted in 200 components = -0.00098925 Jy
! Clean residual min=-0.003754 max=0.003635 Jy/beam
! Clean residual mean=-0.000034 rms=0.000941 Jy/beam
! Combined flux in latest and established models = 2.3791 Jy
selfcal
! Performing phase self-cal
! Adding 18 model components to the UV plane model.
! The established model now contains 155 components and 2.3791 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.209634Jy  sigma=0.001259
! Fit after  self-cal, rms=0.209567Jy  sigma=0.001259
wmodel J1608+1029_S_2003_07_09_pus_map.mod
! Writing 155 model components to file: J1608+1029_S_2003_07_09_pus_map.mod
wobs J1608+1029_S_2003_07_09_pus_uvs.fits
! Writing UV FITS file: J1608+1029_S_2003_07_09_pus_uvs.fits
wwins J1608+1029_S_2003_07_09_pus_map.win
! wwins: Wrote 3 windows to J1608+1029_S_2003_07_09_pus_map.win
x = (field_size-8) * field_cell / 4
addwin -x,x,-x,x
clean (field_size*4),0.01
! Inverting map 
! clean: niter=2048  gain=0.01  cutoff=0
! Component: 050  -  total flux cleaned = -0.000641453 Jy
! Component: 100  -  total flux cleaned = -0.00100178 Jy
! Component: 150  -  total flux cleaned = -0.000945734 Jy
! Component: 200  -  total flux cleaned = -0.00105493 Jy
! Component: 250  -  total flux cleaned = -0.00105461 Jy
! Component: 300  -  total flux cleaned = -0.00105483 Jy
! Component: 350  -  total flux cleaned = -0.00115639 Jy
! Component: 400  -  total flux cleaned = -0.00115688 Jy
! Component: 450  -  total flux cleaned = -0.00130421 Jy
! Component: 500  -  total flux cleaned = -0.00140036 Jy
! Component: 550  -  total flux cleaned = -0.00154253 Jy
! Component: 600  -  total flux cleaned = -0.00177451 Jy
! Component: 650  -  total flux cleaned = -0.00186628 Jy
! Component: 700  -  total flux cleaned = -0.00213683 Jy
! Component: 750  -  total flux cleaned = -0.00218121 Jy
! Component: 800  -  total flux cleaned = -0.00244496 Jy
! Component: 850  -  total flux cleaned = -0.00253159 Jy
! Component: 900  -  total flux cleaned = -0.00265994 Jy
! Component: 950  -  total flux cleaned = -0.00265973 Jy
! Component: 1000  -  total flux cleaned = -0.00274389 Jy
! Component: 1050  -  total flux cleaned = -0.00282668 Jy
! Component: 1100  -  total flux cleaned = -0.00290888 Jy
! Component: 1150  -  total flux cleaned = -0.0029493 Jy
! Component: 1200  -  total flux cleaned = -0.00302996 Jy
! Component: 1250  -  total flux cleaned = -0.00299029 Jy
! Component: 1300  -  total flux cleaned = -0.00299033 Jy
! Component: 1350  -  total flux cleaned = -0.00306846 Jy
! Component: 1400  -  total flux cleaned = -0.00310729 Jy
! Component: 1450  -  total flux cleaned = -0.00310694 Jy
! Component: 1500  -  total flux cleaned = -0.00318296 Jy
! Component: 1550  -  total flux cleaned = -0.00325841 Jy
! Component: 1600  -  total flux cleaned = -0.00318356 Jy
! Component: 1650  -  total flux cleaned = -0.00333197 Jy
! Component: 1700  -  total flux cleaned = -0.00325827 Jy
! Component: 1750  -  total flux cleaned = -0.00329475 Jy
! Component: 1800  -  total flux cleaned = -0.00325907 Jy
! Component: 1850  -  total flux cleaned = -0.00325922 Jy
! Component: 1900  -  total flux cleaned = -0.00329521 Jy
! Component: 1950  -  total flux cleaned = -0.00329517 Jy
! Component: 2000  -  total flux cleaned = -0.00336568 Jy
! Total flux subtracted in 2048 components = -0.00319049 Jy
! Clean residual min=-0.002302 max=0.001982 Jy/beam
! Clean residual mean=-0.000017 rms=0.000694 Jy/beam
! Combined flux in latest and established models = 2.37591 Jy
keep
! Adding 142 model components to the UV plane model.
! The established model now contains 297 components and 2.37591 Jy
![Exited script file: muppet]
wmap "J1608+1029_S_2003_07_09_pus\_map.fits"
! Inverting map 
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 2.969 x 6.283 at -8.78 degrees (North through East)
! Clean map  min=-0.0029769  max=2.0464 Jy/beam
! Writing clean map to FITS file: J1608+1029_S_2003_07_09_pus_map.fits
float peak_flux
peak_flux = peak(flux,max)
print "The peak flux is",peak_flux
! The peak flux is 2.04636 
invert
! Inverting map 
float image_rms
image_rms = imstat(rms)
print "The final image rms is",image_rms
! The final image rms is 0.000692773 
device "J1608+1029_S_2003_07_09_pus\_map.eps/VPS"
! Attempting to open device: 'J1608+1029_S_2003_07_09_pus_map.eps/VPS'
loglevs 100*3*image_rms/peak_flux
! The new contour levels are:
!  -0.101562 0.101562 0.203124 0.406248 0.812495 1.62499 3.24998 6.49996 12.9999 25.9999 51.9997
print "clev=",int(3*image_rms*10000)/10000
! clev= 0.002 
print "peak=",int(1000*peak_flux)/1000
! peak= 2.046 
mapcolor none
! Mapplot colormap: none, contrast: 1 brightness: 0.5.
mapplot cln
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 2.969 x 6.283 at -8.78 degrees (North through East)
! Clean map  min=-0.0029769  max=2.0464 Jy/beam
mapcolor color, 0.9
! Mapplot colormap: rainbow, contrast: 0.9 brightness: 0.5.
quit
! Quitting program
! Log file J1608+1029_S_2003_07_09_pus_uvs.log closed on Mon Apr  8 11:27:40 2013