! Started logfile: J0835+8350_S_2006_02_14_yyk_uvs.log on Wed Jul  5 11:46:53 2006
obs J0835+8350_S_2006_02_14_yyk_uva.fits
! Reading UV FITS file: J0835+8350_S_2006_02_14_yyk_uva.fits
! AN table 1: 881 integrations on 45 of 45 possible baselines.
! Apparent sampling: 0.220759 visibilities/baseline/integration-bin.
! *** This seems a bit low - see "help observe" on the binwid argument.
! Found source: J0835+8350
! 
! There are 4 IFs, and a total of 4 channels:
! 
!  IF  Channel    Frequency  Freq offset  Number of   Overall IF
!       origin    at origin  per channel   channels    bandwidth
!  ------------------------------------------------------------- (Hz)
!  01        1  2.23697e+09        8e+06          1        8e+06
!  02        2  2.26697e+09        8e+06          1        8e+06
!  03        3  2.35697e+09        8e+06          1        8e+06
!  04        4  2.37697e+09        8e+06          1        8e+06
! 
! Polarization(s): RR
! 
! Read 2686 lines of history.
! 
! Reading 35008 visibilities.
select I
! Polarization I is unavailable.
! Selecting polarization: RR,  channels: 1..4
! Reading IF 1 channels: 1..1
! Reading IF 2 channels: 2..2
! Reading IF 3 channels: 3..3
! Reading IF 4 channels: 4..4
![@muppet J0835+8350_S_2006_02_14_yyk]
integer clean_niter
clean_niter = 100
float clean_gain
clean_gain = 0.04
float dynam
dynam = 6.0
float amp_soltime1
amp_soltime1 = 10
float amp_soltime2
amp_soltime2 = 1
float phase_soltime1
phase_soltime1=10
float phase_soltime2
phase_soltime2=0.5
float phase_soltime
phase_soltime=phase_soltime1
float ampcor_selflim
ampcor_selflim=1.20
float thresh
thresh = 0.10
float win_mult
win_mult = 1.8
float time_av
time_av = 30
float old_peak
float new_peak
float flux_cutoff
mapsize field_size, field_cell
! Map grid = 512x512 pixels with 0.500x0.500 milli-arcsec cellsize.
uvav time_av, true
! Averaging into 30 second bins.
! Selecting polarization: RR,  channels: 1..4
! Reading IF 1 channels: 1..1
! Reading IF 2 channels: 2..2
! Reading IF 3 channels: 3..3
! Reading IF 4 channels: 4..4
phase_soltime=phase_soltime1
print "uvstat(rms)=",uvstat(rms),"Jy"
! uvstat(rms)= 0.07679 Jy 
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=12.06 mas, bmaj=50.3 mas, bpa=24.24 degrees
! Estimated noise=2.03529 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=100  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.0494727 Jy
! Component: 100  -  total flux cleaned = 0.0462804 Jy
! Total flux subtracted in 100 components = 0.0462804 Jy
! Clean residual min=-0.004213 max=0.004214 Jy/beam
! Clean residual mean=0.000009 rms=0.001925 Jy/beam
! Combined flux in latest and established models = 0.0462804 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 28 model components to the UV plane model.
! The established model now contains 28 components and 0.0462804 Jy
! 
! Correcting IF 1.
!  A total of 80 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 2.
!  A total of 96 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 3.
!  A total of 112 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 4.
!  A total of 112 telescope corrections were flagged in sub-array 1.
! 
! Fit before self-cal, rms=0.051006Jy  sigma=1.000821
! Fit after  self-cal, rms=0.050400Jy  sigma=0.990124
! Inverting map and beam 
! Estimated beam: bmin=12.06 mas, bmaj=50.3 mas, bpa=24.24 degrees
! Estimated noise=2.03529 mJy/beam.
print "************** FINISHED UNIFORM WEIGHTING CLEAN **************"
! ************** FINISHED UNIFORM WEIGHTING CLEAN ************** 
! 
uvw 0,-2
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -2.
! Radial weighting is not currently selected.
win_mult = win_mult * 1.6
clean_niter = clean_niter * 2
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=13.71 mas, bmaj=47.74 mas, bpa=23.76 degrees
! Estimated noise=1.79985 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.0024084 Jy
! Component: 100  -  total flux cleaned = -0.00461655 Jy
! Component: 150  -  total flux cleaned = -0.00546776 Jy
! Component: 200  -  total flux cleaned = -0.00690943 Jy
! Total flux subtracted in 200 components = -0.00690943 Jy
! Clean residual min=-0.001197 max=0.001208 Jy/beam
! Clean residual mean=0.000018 rms=0.000567 Jy/beam
! Combined flux in latest and established models = 0.039371 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 80 model components to the UV plane model.
! The established model now contains 108 components and 0.039371 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.049543Jy  sigma=0.969936
! Fit after  self-cal, rms=0.049532Jy  sigma=0.969657
! Inverting map 
print "************** FINISHED NATURAL WEIGHTING CLEAN **************"
! ************** FINISHED NATURAL WEIGHTING CLEAN ************** 
! 
restore
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 13.71 x 47.74 at 23.76 degrees (North through East)
! Clean map  min=-0.005779  max=0.053103 Jy/beam
if(peak(flux) < thresh*2)
  selflims ampcor_selflim
  end if
! Selfcal amplitude corrections will be limited to 0.833333 -> 1.2.
! Selfcal phase corrections will not be limited.
gscale
! Performing overall amplitude self-cal
! 
! Correcting IF 1.
!  Amplitude normalization factor in sub-array 1: 0.992606
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        1.11     HN        1.00*    KP        0.90     
!   LA        1.16     MK        1.00*    NL        1.00*    OV        0.98     
!   PT        0.92     SC        1.00*    
! 
! 
! Correcting IF 2.
!  Amplitude normalization factor in sub-array 1: 0.998373
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        0.90     HN        1.00*    KP        1.13     
!   LA        1.01     MK        1.00*    NL        1.00*    OV        1.00*    
!   PT        0.98     SC        1.00*    
! 
! 
! Correcting IF 3.
!  A total of 48 telescope corrections were flagged in sub-array 1.
!  Amplitude normalization factor in sub-array 1: 1
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.00*    FD        0.00*    HN        0.00*    KP        0.00*    
!   LA        0.00*    MK        0.00*    NL        0.00*    OV        0.00*    
!   PT        0.00*    SC        0.00*    
! 
! 
! Correcting IF 4.
!  A total of 48 telescope corrections were flagged in sub-array 1.
!  Amplitude normalization factor in sub-array 1: 1
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.00*    FD        0.00*    HN        0.00*    KP        0.00*    
!   LA        0.00*    MK        0.00*    NL        0.00*    OV        0.00*    
!   PT        0.00*    SC        0.00*    
! 
! 
! Fit before self-cal, rms=0.049532Jy  sigma=0.969657
! Fit after  self-cal, rms=0.045988Jy  sigma=0.947377
selfcal false, false, phase_soltime
! Performing phase self-cal over 10 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.045988Jy  sigma=0.947377
! Fit after  self-cal, rms=0.045984Jy  sigma=0.947201
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=15.39 mas, bmaj=45.06 mas, bpa=21.71 degrees
! Estimated noise=2.03136 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.00335803 Jy
! Component: 100  -  total flux cleaned = 0.00422344 Jy
! Component: 150  -  total flux cleaned = 0.00469462 Jy
! Component: 200  -  total flux cleaned = 0.00477589 Jy
! Total flux subtracted in 200 components = 0.00477589 Jy
! Clean residual min=-0.001015 max=0.001006 Jy/beam
! Clean residual mean=0.000067 rms=0.000417 Jy/beam
! Combined flux in latest and established models = 0.0441469 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 35 model components to the UV plane model.
! The established model now contains 143 components and 0.0441469 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.045775Jy  sigma=0.942282
! Fit after  self-cal, rms=0.045778Jy  sigma=0.942204
! Inverting map 
print "************** FINISHED AMPLITUDE GSCALE SELF-CAL **************"
! ************** FINISHED AMPLITUDE GSCALE SELF-CAL ************** 
! 
phase_soltime=phase_soltime2
selfcal false, false, phase_soltime
! Performing phase self-cal over 0.5 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.045778Jy  sigma=0.942204
! Fit after  self-cal, rms=0.041683Jy  sigma=0.857590
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.00103121 Jy
! Component: 100  -  total flux cleaned = 0.00102468 Jy
! Component: 150  -  total flux cleaned = 0.000912845 Jy
! Component: 200  -  total flux cleaned = 0.000632078 Jy
! Total flux subtracted in 200 components = 0.000632078 Jy
! Clean residual min=-0.000577 max=0.000578 Jy/beam
! Clean residual mean=-0.000023 rms=0.000233 Jy/beam
! Combined flux in latest and established models = 0.044779 Jy
! Performing phase self-cal over 0.5 minute time intervals
! Adding 55 model components to the UV plane model.
! The established model now contains 198 components and 0.044779 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.041457Jy  sigma=0.853509
! Fit after  self-cal, rms=0.041331Jy  sigma=0.849498
! Inverting map 
print "*** FINISHED NATURAL WEIGHTING CLEAN with shorter phase_soltime ***"
! *** FINISHED NATURAL WEIGHTING CLEAN with shorter phase_soltime *** 
! 
dynam = dynam - 0.25
restore
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 15.39 x 45.06 at 21.71 degrees (North through East)
! Clean map  min=-0.0042338  max=0.054937 Jy/beam
if(peak(flux) > thresh)
  selfcal true, true, amp_soltime1
  selfcal false, false, phase_soltime
  flux_cutoff = imstat(rms) * dynam
  repeat
    if (peak(flux) > flux_cutoff) peakwin win_mult
    clean clean_niter,clean_gain
    flux_cutoff = imstat(rms) * dynam
    selfcal false,false,phase_soltime
    new_peak = peak(flux)
    until(new_peak<=flux_cutoff)
  selfcal true, true, amp_soltime2
  selfcal false, false, phase_soltime
  flux_cutoff = imstat(rms) * dynam
  repeat
    if (peak(flux) > flux_cutoff) peakwin win_mult
    clean clean_niter,clean_gain
    flux_cutoff = imstat(rms) * dynam
    selfcal false,false,phase_soltime
    new_peak = peak(flux)
    until(new_peak<=flux_cutoff)
  print "************** FINISHED AMPLITUDE SELF-CAL **************"
  end if
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 20 mega-wavelengths.
win_mult = win_mult * 1.4
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=16.09 mas, bmaj=44.66 mas, bpa=21.33 degrees
! Estimated noise=2.03659 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.000235916 Jy
! Component: 100  -  total flux cleaned = -0.000351537 Jy
! Component: 150  -  total flux cleaned = -0.000564635 Jy
! Component: 200  -  total flux cleaned = -0.000694628 Jy
! Total flux subtracted in 200 components = -0.000694628 Jy
! Clean residual min=-0.000271 max=0.000269 Jy/beam
! Clean residual mean=-0.000027 rms=0.000114 Jy/beam
! Combined flux in latest and established models = 0.0440844 Jy
! Performing phase self-cal over 0.5 minute time intervals
! Adding 84 model components to the UV plane model.
! The established model now contains 279 components and 0.0440844 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.041289Jy  sigma=0.848888
! Fit after  self-cal, rms=0.041300Jy  sigma=0.848478
! Inverting map 
uvtaper 0
! No UV-taper is currently set.
win_mult = win_mult / 1.4
print "************** FINISHED TAPERING SELF-CAL CLEAN **************"
! ************** FINISHED TAPERING SELF-CAL CLEAN ************** 
! 
print "************** CLEARING MODEL AND STARTING OVER **********"
! ************** CLEARING MODEL AND STARTING OVER ********** 
clrmod true,true,true
! clrmod: Cleared the established, tentative and continuum models.
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
clean clean_niter, clean_gain
! Inverting map and beam 
! Estimated beam: bmin=12.62 mas, bmaj=50.87 mas, bpa=24.56 degrees
! Estimated noise=2.26539 mJy/beam.
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.0491803 Jy
! Component: 100  -  total flux cleaned = 0.0511226 Jy
! Component: 150  -  total flux cleaned = 0.0551685 Jy
! Component: 200  -  total flux cleaned = 0.0572038 Jy
! Total flux subtracted in 200 components = 0.0572038 Jy
! Clean residual min=-0.002912 max=0.002937 Jy/beam
! Clean residual mean=0.000091 rms=0.001239 Jy/beam
! Combined flux in latest and established models = 0.0572038 Jy
uvw 0,-2
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -2.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Adding 63 model components to the UV plane model.
! The established model now contains 63 components and 0.0572038 Jy
! Inverting map and beam 
! Estimated beam: bmin=15.39 mas, bmaj=45.06 mas, bpa=21.71 degrees
! Estimated noise=2.03136 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  keep
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.000797889 Jy
! Component: 100  -  total flux cleaned = 0.00156725 Jy
! Component: 150  -  total flux cleaned = 0.00219086 Jy
! Component: 200  -  total flux cleaned = 0.00311242 Jy
! Total flux subtracted in 200 components = 0.00311242 Jy
! Clean residual min=-0.000599 max=0.000610 Jy/beam
! Clean residual mean=-0.000007 rms=0.000283 Jy/beam
! Combined flux in latest and established models = 0.0603162 Jy
! Adding 80 model components to the UV plane model.
! The established model now contains 142 components and 0.0603162 Jy
! Inverting map 
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 20 mega-wavelengths.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=16.09 mas, bmaj=44.66 mas, bpa=21.33 degrees
! Estimated noise=2.03659 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  keep
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.000603882 Jy
! Component: 100  -  total flux cleaned = 0.000977613 Jy
! Component: 150  -  total flux cleaned = 0.00100451 Jy
! Component: 200  -  total flux cleaned = 0.000909619 Jy
! Total flux subtracted in 200 components = 0.000909619 Jy
! Clean residual min=-0.000294 max=0.000297 Jy/beam
! Clean residual mean=-0.000016 rms=0.000137 Jy/beam
! Combined flux in latest and established models = 0.0612258 Jy
! Adding 73 model components to the UV plane model.
! The established model now contains 203 components and 0.0612258 Jy
! Inverting map 
uvtaper 0
! No UV-taper is currently set.
clean
! Inverting map and beam 
! Estimated beam: bmin=15.39 mas, bmaj=45.06 mas, bpa=21.71 degrees
! Estimated noise=2.03136 mJy/beam.
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.000344786 Jy
! Component: 100  -  total flux cleaned = -0.000546605 Jy
! Component: 150  -  total flux cleaned = -0.000759665 Jy
! Component: 200  -  total flux cleaned = -0.000905127 Jy
! Total flux subtracted in 200 components = -0.000905127 Jy
! Clean residual min=-0.000255 max=0.000254 Jy/beam
! Clean residual mean=-0.000020 rms=0.000116 Jy/beam
! Combined flux in latest and established models = 0.0603207 Jy
selfcal false, false, phase_soltime
! Performing phase self-cal over 0.5 minute time intervals
! Adding 50 model components to the UV plane model.
! The established model now contains 252 components and 0.0603207 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.041294Jy  sigma=0.848422
! Fit after  self-cal, rms=0.041296Jy  sigma=0.848291
wmodel J0835+8350_S_2006_02_14_yyk\_map.mod
! Writing 252 model components to file: J0835+8350_S_2006_02_14_yyk_map.mod
wobs J0835+8350_S_2006_02_14_yyk\_uvs.fits
! Writing UV FITS file: J0835+8350_S_2006_02_14_yyk_uvs.fits
wwins J0835+8350_S_2006_02_14_yyk\_map.win
! wwins: No CLEAN windows to write.
! Error occured in command: wwins
![Exited script file: muppet]
! 
wmap "J0835+8350_S_2006_02_14_yyk\_map.fits"
! Inverting map 
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 15.39 x 45.06 at 21.71 degrees (North through East)
! Clean map  min=-0.0034739  max=0.056011 Jy/beam
! Writing clean map to FITS file: J0835+8350_S_2006_02_14_yyk_map.fits
float peak_flux
peak_flux = peak(flux,max)
print "The peak flux is",peak_flux
! The peak flux is 0.0560107 
invert
! Inverting map 
float image_rms
image_rms = imstat(rms)
print "The final image rms is",image_rms
! The final image rms is 0.000119258 
device "J0835+8350_S_2006_02_14_yyk\_map.eps/VPS"
! Attempting to open device: 'J0835+8350_S_2006_02_14_yyk_map.eps/VPS'
loglevs 100*3*image_rms/peak_flux
! The new contour levels are:
!  -0.638762 0.638762 1.27752 2.55505 5.1101 10.2202 20.4404 40.8808 81.7616
print "clev=",int(3*image_rms*10000)/10000
! clev= 0.0003 
print "peak=",int(peak_flux*1000)/1000
! peak= 0.056 
mapcolor none
! Mapplot colormap: none, contrast: 1 brightness: 0.5.
mapplot cln
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 15.39 x 45.06 at 21.71 degrees (North through East)
! Clean map  min=-0.0034739  max=0.056011 Jy/beam
mapcolor color, 0.9
! Mapplot colormap: rainbow, contrast: 0.9 brightness: 0.5.
device "J0835+8350_S_2006_02_14_yyk\_map.gif/gif"
! Attempting to open device: 'J0835+8350_S_2006_02_14_yyk_map.gif/gif'
mapplot cln
quit
! Quitting program
! Log file J0835+8350_S_2006_02_14_yyk_uvs.log closed on Wed Jul  5 11:47:17 2006