! Started logfile: J0638+8411_S_2006_02_14_yyk_uvs.log on Wed Jul  5 11:36:20 2006
obs J0638+8411_S_2006_02_14_yyk_uva.fits
! Reading UV FITS file: J0638+8411_S_2006_02_14_yyk_uva.fits
! AN table 1: 873 integrations on 45 of 45 possible baselines.
! Apparent sampling: 0.221866 visibilities/baseline/integration-bin.
! *** This seems a bit low - see "help observe" on the binwid argument.
! Found source: J0638+8411
! 
! There are 4 IFs, and a total of 4 channels:
! 
!  IF  Channel    Frequency  Freq offset  Number of   Overall IF
!       origin    at origin  per channel   channels    bandwidth
!  ------------------------------------------------------------- (Hz)
!  01        1  2.23697e+09        8e+06          1        8e+06
!  02        2  2.26697e+09        8e+06          1        8e+06
!  03        3  2.35697e+09        8e+06          1        8e+06
!  04        4  2.37697e+09        8e+06          1        8e+06
! 
! Polarization(s): RR
! 
! Read 2683 lines of history.
! 
! Reading 34864 visibilities.
select I
! Polarization I is unavailable.
! Selecting polarization: RR,  channels: 1..4
! Reading IF 1 channels: 1..1
! Reading IF 2 channels: 2..2
! Reading IF 3 channels: 3..3
! Reading IF 4 channels: 4..4
![@muppet J0638+8411_S_2006_02_14_yyk]
integer clean_niter
clean_niter = 100
float clean_gain
clean_gain = 0.04
float dynam
dynam = 6.0
float amp_soltime1
amp_soltime1 = 10
float amp_soltime2
amp_soltime2 = 1
float phase_soltime1
phase_soltime1=10
float phase_soltime2
phase_soltime2=0.5
float phase_soltime
phase_soltime=phase_soltime1
float ampcor_selflim
ampcor_selflim=1.20
float thresh
thresh = 0.10
float win_mult
win_mult = 1.8
float time_av
time_av = 30
float old_peak
float new_peak
float flux_cutoff
mapsize field_size, field_cell
! Map grid = 512x512 pixels with 0.500x0.500 milli-arcsec cellsize.
uvav time_av, true
! Averaging into 30 second bins.
! Selecting polarization: RR,  channels: 1..4
! Reading IF 1 channels: 1..1
! Reading IF 2 channels: 2..2
! Reading IF 3 channels: 3..3
! Reading IF 4 channels: 4..4
phase_soltime=phase_soltime1
print "uvstat(rms)=",uvstat(rms),"Jy"
! uvstat(rms)= 0.148986 Jy 
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=2.091 mas, bmaj=66.83 mas, bpa=20.42 degrees
! Estimated noise=0.832694 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=100  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.0260033 Jy
! Component: 100  -  total flux cleaned = 0.0460925 Jy
! Total flux subtracted in 100 components = 0.0460925 Jy
! Clean residual min=-0.005431 max=0.008767 Jy/beam
! Clean residual mean=0.000086 rms=0.003275 Jy/beam
! Combined flux in latest and established models = 0.0460925 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 27 model components to the UV plane model.
! The established model now contains 27 components and 0.0460925 Jy
! 
! Correcting IF 1.
!  A total of 102 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 2.
!  A total of 102 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 3.
!  A total of 85 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 4.
!  A total of 102 telescope corrections were flagged in sub-array 1.
! 
! Fit before self-cal, rms=0.117721Jy  sigma=2.042291
! Fit after  self-cal, rms=0.117741Jy  sigma=2.041614
! Inverting map and beam 
! Estimated beam: bmin=2.091 mas, bmaj=66.83 mas, bpa=20.42 degrees
! Estimated noise=0.832694 mJy/beam.
print "************** FINISHED UNIFORM WEIGHTING CLEAN **************"
! ************** FINISHED UNIFORM WEIGHTING CLEAN ************** 
! 
uvw 0,-2
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -2.
! Radial weighting is not currently selected.
win_mult = win_mult * 1.6
clean_niter = clean_niter * 2
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=2.113 mas, bmaj=61.86 mas, bpa=20.26 degrees
! Estimated noise=0.619528 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.0174136 Jy
! Component: 100  -  total flux cleaned = 0.0313711 Jy
! Component: 150  -  total flux cleaned = 0.0417501 Jy
! Component: 200  -  total flux cleaned = 0.0497119 Jy
! Total flux subtracted in 200 components = 0.0497119 Jy
! Clean residual min=-0.004430 max=0.004508 Jy/beam
! Clean residual mean=-0.000030 rms=0.002448 Jy/beam
! Combined flux in latest and established models = 0.0958044 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 75 model components to the UV plane model.
! The established model now contains 90 components and 0.0958044 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.093186Jy  sigma=1.498156
! Fit after  self-cal, rms=0.093179Jy  sigma=1.497941
! Inverting map 
print "************** FINISHED NATURAL WEIGHTING CLEAN **************"
! ************** FINISHED NATURAL WEIGHTING CLEAN ************** 
! 
restore
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 2.113 x 61.86 at 20.26 degrees (North through East)
! Clean map  min=-0.0050068  max=0.041434 Jy/beam
if(peak(flux) < thresh*2)
  selflims ampcor_selflim
  end if
! Selfcal amplitude corrections will be limited to 0.833333 -> 1.2.
! Selfcal phase corrections will not be limited.
gscale
! Performing overall amplitude self-cal
! 
! Correcting IF 1.
!  Amplitude normalization factor in sub-array 1: 1
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        1.00*    HN        1.00*    KP        1.00*    
!   LA        1.00*    MK        1.00*    NL        1.00*    OV        1.00*    
!   PT        1.00*    SC        1.00*    
! 
! 
! Correcting IF 2.
!  Amplitude normalization factor in sub-array 1: 1
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        1.00*    HN        1.00*    KP        1.00*    
!   LA        1.00*    MK        1.00*    NL        1.00*    OV        1.00*    
!   PT        1.00*    SC        1.00*    
! 
! 
! Correcting IF 3.
!  Amplitude normalization factor in sub-array 1: 1
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        1.00*    HN        1.00*    KP        1.00*    
!   LA        1.00*    MK        1.00*    NL        1.00*    OV        1.00*    
!   PT        1.00*    SC        1.00*    
! 
! 
! Correcting IF 4.
!  Amplitude normalization factor in sub-array 1: 1
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        1.00*    HN        1.00*    KP        1.00*    
!   LA        1.00*    MK        1.00*    NL        1.00*    OV        1.00*    
!   PT        1.00*    SC        1.00*    
! 
! 
! Fit before self-cal, rms=0.093179Jy  sigma=1.497941
! Fit after  self-cal, rms=0.093179Jy  sigma=1.497941
selfcal false, false, phase_soltime
! Performing phase self-cal over 10 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.093179Jy  sigma=1.497941
! Fit after  self-cal, rms=0.093184Jy  sigma=1.497900
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=2.113 mas, bmaj=61.86 mas, bpa=20.26 degrees
! Estimated noise=0.619528 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.00712263 Jy
! Component: 100  -  total flux cleaned = 0.0122853 Jy
! Component: 150  -  total flux cleaned = 0.0152972 Jy
! Component: 200  -  total flux cleaned = 0.0175556 Jy
! Total flux subtracted in 200 components = 0.0175556 Jy
! Clean residual min=-0.002963 max=0.002962 Jy/beam
! Clean residual mean=-0.000037 rms=0.001731 Jy/beam
! Combined flux in latest and established models = 0.11336 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 101 model components to the UV plane model.
! The established model now contains 180 components and 0.11336 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.084617Jy  sigma=1.288450
! Fit after  self-cal, rms=0.084612Jy  sigma=1.288282
! Inverting map 
print "************** FINISHED AMPLITUDE GSCALE SELF-CAL **************"
! ************** FINISHED AMPLITUDE GSCALE SELF-CAL ************** 
! 
phase_soltime=phase_soltime2
selfcal false, false, phase_soltime
! Performing phase self-cal over 0.5 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.084612Jy  sigma=1.288282
! Fit after  self-cal, rms=0.080414Jy  sigma=1.220320
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.00425992 Jy
! Component: 100  -  total flux cleaned = 0.00641442 Jy
! Component: 150  -  total flux cleaned = 0.00799148 Jy
! Component: 200  -  total flux cleaned = 0.00926974 Jy
! Total flux subtracted in 200 components = 0.00926975 Jy
! Clean residual min=-0.002124 max=0.002144 Jy/beam
! Clean residual mean=-0.000042 rms=0.001300 Jy/beam
! Combined flux in latest and established models = 0.12263 Jy
! Performing phase self-cal over 0.5 minute time intervals
! Adding 103 model components to the UV plane model.
! The established model now contains 265 components and 0.12263 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.075023Jy  sigma=1.089290
! Fit after  self-cal, rms=0.074368Jy  sigma=1.081624
! Inverting map 
print "*** FINISHED NATURAL WEIGHTING CLEAN with shorter phase_soltime ***"
! *** FINISHED NATURAL WEIGHTING CLEAN with shorter phase_soltime *** 
! 
dynam = dynam - 0.25
restore
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 2.113 x 61.86 at 20.26 degrees (North through East)
! Clean map  min=-0.0059036  max=0.038885 Jy/beam
if(peak(flux) > thresh)
  selfcal true, true, amp_soltime1
  selfcal false, false, phase_soltime
  flux_cutoff = imstat(rms) * dynam
  repeat
    if (peak(flux) > flux_cutoff) peakwin win_mult
    clean clean_niter,clean_gain
    flux_cutoff = imstat(rms) * dynam
    selfcal false,false,phase_soltime
    new_peak = peak(flux)
    until(new_peak<=flux_cutoff)
  selfcal true, true, amp_soltime2
  selfcal false, false, phase_soltime
  flux_cutoff = imstat(rms) * dynam
  repeat
    if (peak(flux) > flux_cutoff) peakwin win_mult
    clean clean_niter,clean_gain
    flux_cutoff = imstat(rms) * dynam
    selfcal false,false,phase_soltime
    new_peak = peak(flux)
    until(new_peak<=flux_cutoff)
  print "************** FINISHED AMPLITUDE SELF-CAL **************"
  end if
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 20 mega-wavelengths.
win_mult = win_mult * 1.4
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=5.197 mas, bmaj=44.12 mas, bpa=20.13 degrees
! Estimated noise=1.57956 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.000758558 Jy
! Component: 100  -  total flux cleaned = -0.00802665 Jy
! Component: 150  -  total flux cleaned = -0.0137641 Jy
! Component: 200  -  total flux cleaned = -0.0172394 Jy
! Total flux subtracted in 200 components = -0.0172394 Jy
! Clean residual min=-0.002481 max=0.002516 Jy/beam
! Clean residual mean=-0.000027 rms=0.001439 Jy/beam
! Combined flux in latest and established models = 0.10539 Jy
! Performing phase self-cal over 0.5 minute time intervals
! Adding 163 model components to the UV plane model.
! The established model now contains 415 components and 0.10539 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.065839Jy  sigma=0.898546
! Fit after  self-cal, rms=0.065514Jy  sigma=0.894463
! Inverting map 
uvtaper 0
! No UV-taper is currently set.
win_mult = win_mult / 1.4
print "************** FINISHED TAPERING SELF-CAL CLEAN **************"
! ************** FINISHED TAPERING SELF-CAL CLEAN ************** 
! 
print "************** CLEARING MODEL AND STARTING OVER **********"
! ************** CLEARING MODEL AND STARTING OVER ********** 
clrmod true,true,true
! clrmod: Cleared the established, tentative and continuum models.
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
clean clean_niter, clean_gain
! Inverting map and beam 
! Estimated beam: bmin=2.091 mas, bmaj=66.83 mas, bpa=20.42 degrees
! Estimated noise=0.832694 mJy/beam.
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.0266931 Jy
! Component: 100  -  total flux cleaned = 0.0472509 Jy
! Component: 150  -  total flux cleaned = 0.0633237 Jy
! Component: 200  -  total flux cleaned = 0.0761462 Jy
! Total flux subtracted in 200 components = 0.0761462 Jy
! Clean residual min=-0.005240 max=0.005758 Jy/beam
! Clean residual mean=0.000094 rms=0.002594 Jy/beam
! Combined flux in latest and established models = 0.0761462 Jy
uvw 0,-2
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -2.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Adding 61 model components to the UV plane model.
! The established model now contains 61 components and 0.0761462 Jy
! Inverting map and beam 
! Estimated beam: bmin=2.113 mas, bmaj=61.86 mas, bpa=20.26 degrees
! Estimated noise=0.619528 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  keep
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.0112448 Jy
! Component: 100  -  total flux cleaned = 0.0192381 Jy
! Component: 150  -  total flux cleaned = 0.0256679 Jy
! Component: 200  -  total flux cleaned = 0.0308127 Jy
! Total flux subtracted in 200 components = 0.0308127 Jy
! Clean residual min=-0.003754 max=0.003828 Jy/beam
! Clean residual mean=-0.000034 rms=0.002129 Jy/beam
! Combined flux in latest and established models = 0.106959 Jy
! Adding 104 model components to the UV plane model.
! The established model now contains 156 components and 0.106959 Jy
! Inverting map 
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 20 mega-wavelengths.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=5.197 mas, bmaj=44.12 mas, bpa=20.13 degrees
! Estimated noise=1.57956 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  keep
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.0193161 Jy
! Component: 100  -  total flux cleaned = 0.0111454 Jy
! Component: 150  -  total flux cleaned = 0.0052781 Jy
! Component: 200  -  total flux cleaned = 0.00221965 Jy
! Total flux subtracted in 200 components = 0.00221965 Jy
! Clean residual min=-0.005695 max=0.005688 Jy/beam
! Clean residual mean=-0.000032 rms=0.002831 Jy/beam
! Combined flux in latest and established models = 0.109179 Jy
! Adding 130 model components to the UV plane model.
! The established model now contains 282 components and 0.109179 Jy
! Inverting map 
uvtaper 0
! No UV-taper is currently set.
clean
! Inverting map and beam 
! Estimated beam: bmin=2.113 mas, bmaj=61.86 mas, bpa=20.26 degrees
! Estimated noise=0.619528 mJy/beam.
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.00256882 Jy
! Component: 100  -  total flux cleaned = -0.00412664 Jy
! Component: 150  -  total flux cleaned = -0.00507512 Jy
! Component: 200  -  total flux cleaned = -0.00542821 Jy
! Total flux subtracted in 200 components = -0.00542821 Jy
! Clean residual min=-0.000844 max=0.000852 Jy/beam
! Clean residual mean=-0.000020 rms=0.000346 Jy/beam
! Combined flux in latest and established models = 0.10375 Jy
selfcal false, false, phase_soltime
! Performing phase self-cal over 0.5 minute time intervals
! Adding 35 model components to the UV plane model.
! The established model now contains 314 components and 0.10375 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.065647Jy  sigma=0.898057
! Fit after  self-cal, rms=0.065475Jy  sigma=0.896928
wmodel J0638+8411_S_2006_02_14_yyk\_map.mod
! Writing 314 model components to file: J0638+8411_S_2006_02_14_yyk_map.mod
wobs J0638+8411_S_2006_02_14_yyk\_uvs.fits
! Writing UV FITS file: J0638+8411_S_2006_02_14_yyk_uvs.fits
wwins J0638+8411_S_2006_02_14_yyk\_map.win
! wwins: No CLEAN windows to write.
! Error occured in command: wwins
![Exited script file: muppet]
! 
wmap "J0638+8411_S_2006_02_14_yyk\_map.fits"
! Inverting map 
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 2.113 x 61.86 at 20.26 degrees (North through East)
! Clean map  min=-0.009375  max=0.027924 Jy/beam
! Writing clean map to FITS file: J0638+8411_S_2006_02_14_yyk_map.fits
float peak_flux
peak_flux = peak(flux,max)
print "The peak flux is",peak_flux
! The peak flux is 0.0279245 
invert
! Inverting map 
float image_rms
image_rms = imstat(rms)
print "The final image rms is",image_rms
! The final image rms is 0.000365246 
device "J0638+8411_S_2006_02_14_yyk\_map.eps/VPS"
! Attempting to open device: 'J0638+8411_S_2006_02_14_yyk_map.eps/VPS'
loglevs 100*3*image_rms/peak_flux
! The new contour levels are:
!  -3.92394 3.92394 7.84788 15.6958 31.3915 62.783
print "clev=",int(3*image_rms*10000)/10000
! clev= 0.001 
print "peak=",int(peak_flux*1000)/1000
! peak= 0.027 
mapcolor none
! Mapplot colormap: none, contrast: 1 brightness: 0.5.
mapplot cln
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 2.113 x 61.86 at 20.26 degrees (North through East)
! Clean map  min=-0.009375  max=0.027924 Jy/beam
mapcolor color, 0.9
! Mapplot colormap: rainbow, contrast: 0.9 brightness: 0.5.
device "J0638+8411_S_2006_02_14_yyk\_map.gif/gif"
! Attempting to open device: 'J0638+8411_S_2006_02_14_yyk_map.gif/gif'
mapplot cln
quit
! Quitting program
! Log file J0638+8411_S_2006_02_14_yyk_uvs.log closed on Wed Jul  5 11:36:51 2006