! Started logfile: J0540+7519_S_2006_02_16_yyk_uvs.log on Wed Jul  5 11:28:00 2006
obs J0540+7519_S_2006_02_16_yyk_uva.fits
! Reading UV FITS file: J0540+7519_S_2006_02_16_yyk_uva.fits
! AN table 1: 877 integrations on 45 of 45 possible baselines.
! Apparent sampling: 0.33118 visibilities/baseline/integration-bin.
! *** This seems a bit low - see "help observe" on the binwid argument.
! Found source: J0540+7519
! 
! There are 4 IFs, and a total of 4 channels:
! 
!  IF  Channel    Frequency  Freq offset  Number of   Overall IF
!       origin    at origin  per channel   channels    bandwidth
!  ------------------------------------------------------------- (Hz)
!  01        1  2.23697e+09        8e+06          1        8e+06
!  02        2  2.26697e+09        8e+06          1        8e+06
!  03        3  2.35697e+09        8e+06          1        8e+06
!  04        4  2.37697e+09        8e+06          1        8e+06
! 
! Polarization(s): RR
! 
! Read 2421 lines of history.
! 
! Reading 52280 visibilities.
select I
! Polarization I is unavailable.
! Selecting polarization: RR,  channels: 1..4
! Reading IF 1 channels: 1..1
! Reading IF 2 channels: 2..2
! Reading IF 3 channels: 3..3
! Reading IF 4 channels: 4..4
![@muppet J0540+7519_S_2006_02_16_yyk]
integer clean_niter
clean_niter = 100
float clean_gain
clean_gain = 0.04
float dynam
dynam = 6.0
float amp_soltime1
amp_soltime1 = 10
float amp_soltime2
amp_soltime2 = 1
float phase_soltime1
phase_soltime1=10
float phase_soltime2
phase_soltime2=0.5
float phase_soltime
phase_soltime=phase_soltime1
float ampcor_selflim
ampcor_selflim=1.20
float thresh
thresh = 0.10
float win_mult
win_mult = 1.8
float time_av
time_av = 30
float old_peak
float new_peak
float flux_cutoff
mapsize field_size, field_cell
! Map grid = 512x512 pixels with 0.500x0.500 milli-arcsec cellsize.
uvav time_av, true
! Averaging into 30 second bins.
! Selecting polarization: RR,  channels: 1..4
! Reading IF 1 channels: 1..1
! Reading IF 2 channels: 2..2
! Reading IF 3 channels: 3..3
! Reading IF 4 channels: 4..4
phase_soltime=phase_soltime1
print "uvstat(rms)=",uvstat(rms),"Jy"
! uvstat(rms)= 0.106089 Jy 
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=8.057 mas, bmaj=22.66 mas, bpa=56.57 degrees
! Estimated noise=1.66277 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=100  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.0478651 Jy
! Component: 100  -  total flux cleaned = 0.05283 Jy
! Total flux subtracted in 100 components = 0.05283 Jy
! Clean residual min=-0.007318 max=0.007336 Jy/beam
! Clean residual mean=0.000539 rms=0.004506 Jy/beam
! Combined flux in latest and established models = 0.05283 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 49 model components to the UV plane model.
! The established model now contains 49 components and 0.05283 Jy
! 
! Correcting IF 1.
!  A total of 112 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 2.
!  A total of 95 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 3.
!  A total of 78 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 4.
!  A total of 95 telescope corrections were flagged in sub-array 1.
! 
! Fit before self-cal, rms=0.082575Jy  sigma=1.162811
! Fit after  self-cal, rms=0.082442Jy  sigma=1.160278
! Inverting map and beam 
! Estimated beam: bmin=8.057 mas, bmaj=22.66 mas, bpa=56.57 degrees
! Estimated noise=1.66277 mJy/beam.
print "************** FINISHED UNIFORM WEIGHTING CLEAN **************"
! ************** FINISHED UNIFORM WEIGHTING CLEAN ************** 
! 
uvw 0,-2
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -2.
! Radial weighting is not currently selected.
win_mult = win_mult * 1.6
clean_niter = clean_niter * 2
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=8.982 mas, bmaj=22.73 mas, bpa=56.2 degrees
! Estimated noise=1.17823 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.00825075 Jy
! Component: 100  -  total flux cleaned = 0.0127524 Jy
! Component: 150  -  total flux cleaned = 0.0154755 Jy
! Component: 200  -  total flux cleaned = 0.0182293 Jy
! Total flux subtracted in 200 components = 0.0182293 Jy
! Clean residual min=-0.003033 max=0.003026 Jy/beam
! Clean residual mean=0.000291 rms=0.002114 Jy/beam
! Combined flux in latest and established models = 0.0710593 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 162 model components to the UV plane model.
! The established model now contains 211 components and 0.0710593 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.078348Jy  sigma=1.044859
! Fit after  self-cal, rms=0.078268Jy  sigma=1.043717
! Inverting map 
print "************** FINISHED NATURAL WEIGHTING CLEAN **************"
! ************** FINISHED NATURAL WEIGHTING CLEAN ************** 
! 
restore
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 8.982 x 22.73 at 56.2 degrees (North through East)
! Clean map  min=-0.008193  max=0.048998 Jy/beam
if(peak(flux) < thresh*2)
  selflims ampcor_selflim
  end if
! Selfcal amplitude corrections will be limited to 0.833333 -> 1.2.
! Selfcal phase corrections will not be limited.
gscale
! Performing overall amplitude self-cal
! 
! Correcting IF 1.
!  Amplitude normalization factor in sub-array 1: 1.00678
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        1.02     HN        1.00*    KP        1.06     
!   LA        0.94     MK        1.00*    NL        1.00*    OV        1.00*    
!   PT        0.91     SC        1.00*    
! 
! 
! Correcting IF 2.
!  Amplitude normalization factor in sub-array 1: 0.990945
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        1.10     HN        1.00*    KP        1.04     
!   LA        0.97     MK        1.00*    NL        1.00*    OV        1.12     
!   PT        0.86     SC        1.00*    
! 
! 
! Correcting IF 3.
!  Amplitude normalization factor in sub-array 1: 1.00125
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.03     FD        0.99     HN        1.00*    KP        1.13     
!   LA        0.84     MK        1.00*    NL        1.00*    OV        1.12     
!   PT        0.88     SC        1.00*    
! 
! 
! Correcting IF 4.
!  Amplitude normalization factor in sub-array 1: 1
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        1.00*    HN        1.00*    KP        1.00*    
!   LA        1.00*    MK        1.00*    NL        1.00*    OV        1.00*    
!   PT        1.00*    SC        1.00*    
! 
! 
! Fit before self-cal, rms=0.078268Jy  sigma=1.043717
! Fit after  self-cal, rms=0.077629Jy  sigma=1.029424
selfcal false, false, phase_soltime
! Performing phase self-cal over 10 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.077629Jy  sigma=1.029424
! Fit after  self-cal, rms=0.077630Jy  sigma=1.029267
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=9.117 mas, bmaj=24.23 mas, bpa=55.61 degrees
! Estimated noise=1.16179 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.00193427 Jy
! Component: 100  -  total flux cleaned = 0.00182913 Jy
! Component: 150  -  total flux cleaned = 0.00149115 Jy
! Component: 200  -  total flux cleaned = 0.00161159 Jy
! Total flux subtracted in 200 components = 0.00161159 Jy
! Clean residual min=-0.001608 max=0.001627 Jy/beam
! Clean residual mean=-0.000008 rms=0.000544 Jy/beam
! Combined flux in latest and established models = 0.0726709 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 67 model components to the UV plane model.
! The established model now contains 278 components and 0.0726709 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.077152Jy  sigma=1.022227
! Fit after  self-cal, rms=0.077117Jy  sigma=1.021677
! Inverting map 
print "************** FINISHED AMPLITUDE GSCALE SELF-CAL **************"
! ************** FINISHED AMPLITUDE GSCALE SELF-CAL ************** 
! 
phase_soltime=phase_soltime2
selfcal false, false, phase_soltime
! Performing phase self-cal over 0.5 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.077117Jy  sigma=1.021677
! Fit after  self-cal, rms=0.071514Jy  sigma=0.924495
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.00185733 Jy
! Component: 100  -  total flux cleaned = 0.00123151 Jy
! Component: 150  -  total flux cleaned = 0.000718982 Jy
! Component: 200  -  total flux cleaned = 0.0002556 Jy
! Total flux subtracted in 200 components = 0.0002556 Jy
! Clean residual min=-0.000697 max=0.000692 Jy/beam
! Clean residual mean=0.000000 rms=0.000306 Jy/beam
! Combined flux in latest and established models = 0.0729265 Jy
! Performing phase self-cal over 0.5 minute time intervals
! Adding 79 model components to the UV plane model.
! The established model now contains 356 components and 0.0729265 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.071016Jy  sigma=0.917217
! Fit after  self-cal, rms=0.069524Jy  sigma=0.904105
! Inverting map 
print "*** FINISHED NATURAL WEIGHTING CLEAN with shorter phase_soltime ***"
! *** FINISHED NATURAL WEIGHTING CLEAN with shorter phase_soltime *** 
! 
dynam = dynam - 0.25
restore
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 9.117 x 24.23 at 55.61 degrees (North through East)
! Clean map  min=-0.006348  max=0.050179 Jy/beam
if(peak(flux) > thresh)
  selfcal true, true, amp_soltime1
  selfcal false, false, phase_soltime
  flux_cutoff = imstat(rms) * dynam
  repeat
    if (peak(flux) > flux_cutoff) peakwin win_mult
    clean clean_niter,clean_gain
    flux_cutoff = imstat(rms) * dynam
    selfcal false,false,phase_soltime
    new_peak = peak(flux)
    until(new_peak<=flux_cutoff)
  selfcal true, true, amp_soltime2
  selfcal false, false, phase_soltime
  flux_cutoff = imstat(rms) * dynam
  repeat
    if (peak(flux) > flux_cutoff) peakwin win_mult
    clean clean_niter,clean_gain
    flux_cutoff = imstat(rms) * dynam
    selfcal false,false,phase_soltime
    new_peak = peak(flux)
    until(new_peak<=flux_cutoff)
  print "************** FINISHED AMPLITUDE SELF-CAL **************"
  end if
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 20 mega-wavelengths.
win_mult = win_mult * 1.4
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=10.5 mas, bmaj=24.35 mas, bpa=53.63 degrees
! Estimated noise=1.18553 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.00056961 Jy
! Component: 100  -  total flux cleaned = -0.00134444 Jy
! Component: 150  -  total flux cleaned = -0.00189054 Jy
! Component: 200  -  total flux cleaned = -0.00213041 Jy
! Total flux subtracted in 200 components = -0.00213041 Jy
! Clean residual min=-0.000492 max=0.000483 Jy/beam
! Clean residual mean=-0.000000 rms=0.000223 Jy/beam
! Combined flux in latest and established models = 0.0707961 Jy
! Performing phase self-cal over 0.5 minute time intervals
! Adding 64 model components to the UV plane model.
! The established model now contains 406 components and 0.0707961 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.069394Jy  sigma=0.902612
! Fit after  self-cal, rms=0.068898Jy  sigma=0.899698
! Inverting map 
uvtaper 0
! No UV-taper is currently set.
win_mult = win_mult / 1.4
print "************** FINISHED TAPERING SELF-CAL CLEAN **************"
! ************** FINISHED TAPERING SELF-CAL CLEAN ************** 
! 
print "************** CLEARING MODEL AND STARTING OVER **********"
! ************** CLEARING MODEL AND STARTING OVER ********** 
clrmod true,true,true
! clrmod: Cleared the established, tentative and continuum models.
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
clean clean_niter, clean_gain
! Inverting map and beam 
! Estimated beam: bmin=8.052 mas, bmaj=23.49 mas, bpa=56.46 degrees
! Estimated noise=1.65568 mJy/beam.
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.0533255 Jy
! Component: 100  -  total flux cleaned = 0.0610283 Jy
! Component: 150  -  total flux cleaned = 0.069969 Jy
! Component: 200  -  total flux cleaned = 0.0765171 Jy
! Total flux subtracted in 200 components = 0.0765171 Jy
! Clean residual min=-0.003902 max=0.003960 Jy/beam
! Clean residual mean=0.000286 rms=0.002295 Jy/beam
! Combined flux in latest and established models = 0.0765171 Jy
uvw 0,-2
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -2.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Adding 90 model components to the UV plane model.
! The established model now contains 90 components and 0.0765171 Jy
! Inverting map and beam 
! Estimated beam: bmin=9.117 mas, bmaj=24.23 mas, bpa=55.61 degrees
! Estimated noise=1.16179 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  keep
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.00477765 Jy
! Component: 100  -  total flux cleaned = 0.00736653 Jy
! Component: 150  -  total flux cleaned = 0.00587143 Jy
! Component: 200  -  total flux cleaned = 0.00557147 Jy
! Total flux subtracted in 200 components = 0.00557147 Jy
! Clean residual min=-0.001518 max=0.001506 Jy/beam
! Clean residual mean=0.000107 rms=0.000897 Jy/beam
! Combined flux in latest and established models = 0.0820886 Jy
! Adding 119 model components to the UV plane model.
! The established model now contains 207 components and 0.0820886 Jy
! Inverting map 
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 20 mega-wavelengths.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=10.5 mas, bmaj=24.35 mas, bpa=53.63 degrees
! Estimated noise=1.18553 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  keep
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.000405724 Jy
! Component: 100  -  total flux cleaned = 0.000326267 Jy
! Component: 150  -  total flux cleaned = -0.000227875 Jy
! Component: 200  -  total flux cleaned = -0.000717541 Jy
! Total flux subtracted in 200 components = -0.000717541 Jy
! Clean residual min=-0.001248 max=0.001269 Jy/beam
! Clean residual mean=0.000014 rms=0.000498 Jy/beam
! Combined flux in latest and established models = 0.081371 Jy
! Adding 88 model components to the UV plane model.
! The established model now contains 286 components and 0.0813711 Jy
! Inverting map 
uvtaper 0
! No UV-taper is currently set.
clean
! Inverting map and beam 
! Estimated beam: bmin=9.117 mas, bmaj=24.23 mas, bpa=55.61 degrees
! Estimated noise=1.16179 mJy/beam.
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.00112724 Jy
! Component: 100  -  total flux cleaned = -0.00192547 Jy
! Component: 150  -  total flux cleaned = -0.00253133 Jy
! Component: 200  -  total flux cleaned = -0.00299687 Jy
! Total flux subtracted in 200 components = -0.00299687 Jy
! Clean residual min=-0.000511 max=0.000495 Jy/beam
! Clean residual mean=0.000014 rms=0.000222 Jy/beam
! Combined flux in latest and established models = 0.0783742 Jy
selfcal false, false, phase_soltime
! Performing phase self-cal over 0.5 minute time intervals
! Adding 59 model components to the UV plane model.
! The established model now contains 345 components and 0.0783742 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.068867Jy  sigma=0.900532
! Fit after  self-cal, rms=0.068643Jy  sigma=0.899669
wmodel J0540+7519_S_2006_02_16_yyk\_map.mod
! Writing 345 model components to file: J0540+7519_S_2006_02_16_yyk_map.mod
wobs J0540+7519_S_2006_02_16_yyk\_uvs.fits
! Writing UV FITS file: J0540+7519_S_2006_02_16_yyk_uvs.fits
wwins J0540+7519_S_2006_02_16_yyk\_map.win
! wwins: No CLEAN windows to write.
! Error occured in command: wwins
![Exited script file: muppet]
! 
wmap "J0540+7519_S_2006_02_16_yyk\_map.fits"
! Inverting map 
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 9.117 x 24.23 at 55.61 degrees (North through East)
! Clean map  min=-0.0049766  max=0.050063 Jy/beam
! Writing clean map to FITS file: J0540+7519_S_2006_02_16_yyk_map.fits
float peak_flux
peak_flux = peak(flux,max)
print "The peak flux is",peak_flux
! The peak flux is 0.0500633 
invert
! Inverting map 
float image_rms
image_rms = imstat(rms)
print "The final image rms is",image_rms
! The final image rms is 0.000223464 
device "J0540+7519_S_2006_02_16_yyk\_map.eps/VPS"
! Attempting to open device: 'J0540+7519_S_2006_02_16_yyk_map.eps/VPS'
loglevs 100*3*image_rms/peak_flux
! The new contour levels are:
!  -1.33909 1.33909 2.67818 5.35635 10.7127 21.4254 42.8508 85.7017
print "clev=",int(3*image_rms*10000)/10000
! clev= 0.0006 
print "peak=",int(peak_flux*1000)/1000
! peak= 0.05 
mapcolor none
! Mapplot colormap: none, contrast: 1 brightness: 0.5.
mapplot cln
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 9.117 x 24.23 at 55.61 degrees (North through East)
! Clean map  min=-0.0049766  max=0.050063 Jy/beam
mapcolor color, 0.9
! Mapplot colormap: rainbow, contrast: 0.9 brightness: 0.5.
device "J0540+7519_S_2006_02_16_yyk\_map.gif/gif"
! Attempting to open device: 'J0540+7519_S_2006_02_16_yyk_map.gif/gif'
mapplot cln
quit
! Quitting program
! Log file J0540+7519_S_2006_02_16_yyk_uvs.log closed on Wed Jul  5 11:28:21 2006