! Started logfile: J0013+7748_S_2006_02_23_yyk_uvs.log on Wed Jul  5 10:56:33 2006
obs J0013+7748_S_2006_02_23_yyk_uva.fits
! Reading UV FITS file: J0013+7748_S_2006_02_23_yyk_uva.fits
! AN table 1: 877 integrations on 45 of 45 possible baselines.
! Apparent sampling: 0.133029 visibilities/baseline/integration-bin.
! *** This seems a bit low - see "help observe" on the binwid argument.
! Found source: J0013+7748
! 
! There are 4 IFs, and a total of 4 channels:
! 
!  IF  Channel    Frequency  Freq offset  Number of   Overall IF
!       origin    at origin  per channel   channels    bandwidth
!  ------------------------------------------------------------- (Hz)
!  01        1  2.23697e+09        8e+06          1        8e+06
!  02        2  2.26697e+09        8e+06          1        8e+06
!  03        3  2.35697e+09        8e+06          1        8e+06
!  04        4  2.37697e+09        8e+06          1        8e+06
! 
! Polarization(s): RR
! 
! Read 2423 lines of history.
! 
! Reading 21000 visibilities.
select I
! Polarization I is unavailable.
! Selecting polarization: RR,  channels: 1..4
! Reading IF 1 channels: 1..1
! Reading IF 2 channels: 2..2
! Reading IF 3 channels: 3..3
! Reading IF 4 channels: 4..4
![@muppet J0013+7748_S_2006_02_23_yyk]
integer clean_niter
clean_niter = 100
float clean_gain
clean_gain = 0.04
float dynam
dynam = 6.0
float amp_soltime1
amp_soltime1 = 10
float amp_soltime2
amp_soltime2 = 1
float phase_soltime1
phase_soltime1=10
float phase_soltime2
phase_soltime2=0.5
float phase_soltime
phase_soltime=phase_soltime1
float ampcor_selflim
ampcor_selflim=1.20
float thresh
thresh = 0.10
float win_mult
win_mult = 1.8
float time_av
time_av = 30
float old_peak
float new_peak
float flux_cutoff
mapsize field_size, field_cell
! Map grid = 512x512 pixels with 0.500x0.500 milli-arcsec cellsize.
uvav time_av, true
! Averaging into 30 second bins.
! Selecting polarization: RR,  channels: 1..4
! Reading IF 1 channels: 1..1
! Reading IF 2 channels: 2..2
! Reading IF 3 channels: 3..3
! Reading IF 4 channels: 4..4
phase_soltime=phase_soltime1
print "uvstat(rms)=",uvstat(rms),"Jy"
! uvstat(rms)= 0.192462 Jy 
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=19.55 mas, bmaj=40.83 mas, bpa=-4.074 degrees
! Estimated noise=2.46062 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=100  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.126013 Jy
! Component: 100  -  total flux cleaned = 0.156126 Jy
! Total flux subtracted in 100 components = 0.156126 Jy
! Clean residual min=-0.023443 max=0.023669 Jy/beam
! Clean residual mean=0.001894 rms=0.014068 Jy/beam
! Combined flux in latest and established models = 0.156126 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 38 model components to the UV plane model.
! The established model now contains 38 components and 0.156126 Jy
! 
! Correcting IF 1.
!  A total of 96 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 2.
!  A total of 96 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 3.
!  A total of 96 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 4.
!  A total of 160 telescope corrections were flagged in sub-array 1.
! 
! Fit before self-cal, rms=0.088799Jy  sigma=1.869202
! Fit after  self-cal, rms=0.088683Jy  sigma=1.867345
! Inverting map and beam 
! Estimated beam: bmin=19.55 mas, bmaj=40.83 mas, bpa=-4.074 degrees
! Estimated noise=2.46062 mJy/beam.
print "************** FINISHED UNIFORM WEIGHTING CLEAN **************"
! ************** FINISHED UNIFORM WEIGHTING CLEAN ************** 
! 
uvw 0,-2
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -2.
! Radial weighting is not currently selected.
win_mult = win_mult * 1.6
clean_niter = clean_niter * 2
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=22.85 mas, bmaj=39.68 mas, bpa=-7.586 degrees
! Estimated noise=2.0557 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.0454312 Jy
! Component: 100  -  total flux cleaned = -0.0919604 Jy
! Component: 150  -  total flux cleaned = -0.132966 Jy
! Component: 200  -  total flux cleaned = -0.161128 Jy
! Total flux subtracted in 200 components = -0.161128 Jy
! Clean residual min=-0.018341 max=0.017388 Jy/beam
! Clean residual mean=-0.001376 rms=0.006872 Jy/beam
! Combined flux in latest and established models = -0.00500146 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 50 model components to the UV plane model.
! The established model now contains 88 components and -0.00500146 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.062327Jy  sigma=1.171596
! Fit after  self-cal, rms=0.062189Jy  sigma=1.167410
! Inverting map 
print "************** FINISHED NATURAL WEIGHTING CLEAN **************"
! ************** FINISHED NATURAL WEIGHTING CLEAN ************** 
! 
restore
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 22.85 x 39.68 at -7.586 degrees (North through East)
! Clean map  min=-0.054845  max=0.089422 Jy/beam
if(peak(flux) < thresh*2)
  selflims ampcor_selflim
  end if
! Selfcal amplitude corrections will be limited to 0.833333 -> 1.2.
! Selfcal phase corrections will not be limited.
gscale
! Performing overall amplitude self-cal
! 
! Correcting IF 1.
!  Amplitude normalization factor in sub-array 1: 0.982516
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        1.16     HN        1.00*    KP        1.04     
!   LA        0.99     MK        1.00*    NL        1.00*    OV        1.00*    
!   PT        0.99     SC        1.00*    
! 
! 
! Correcting IF 2.
!  Amplitude normalization factor in sub-array 1: 1
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        1.00*    HN        1.00*    KP        1.00*    
!   LA        1.00*    MK        1.00*    NL        1.00*    OV        1.00*    
!   PT        1.00*    SC        1.00*    
! 
! 
! Correcting IF 3.
!  Amplitude normalization factor in sub-array 1: 0.995132
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00*    FD        1.06     HN        1.00*    KP        0.98     
!   LA        0.98     MK        1.00*    NL        1.00*    OV        1.00*    
!   PT        1.03     SC        1.00*    
! 
! 
! Correcting IF 4.
!  Amplitude normalization factor in sub-array 1: 1
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.00*    FD        0.00*    HN        0.00*    KP        0.00*    
!   LA        0.00*    MK        0.00*    NL        0.00*    OV        0.00*    
!   PT        0.00*    SC        0.00*    
! 
! 
! Fit before self-cal, rms=0.062189Jy  sigma=1.167410
! Fit after  self-cal, rms=0.063090Jy  sigma=1.155451
selfcal false, false, phase_soltime
! Performing phase self-cal over 10 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.063090Jy  sigma=1.155451
! Fit after  self-cal, rms=0.063105Jy  sigma=1.155808
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=23.1 mas, bmaj=40.17 mas, bpa=-10.23 degrees
! Estimated noise=2.08528 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.0146017 Jy
! Component: 100  -  total flux cleaned = -0.0131883 Jy
! Component: 150  -  total flux cleaned = -0.0151723 Jy
! Component: 200  -  total flux cleaned = -0.0163997 Jy
! Total flux subtracted in 200 components = -0.0163997 Jy
! Clean residual min=-0.007899 max=0.008184 Jy/beam
! Clean residual mean=-0.000263 rms=0.003850 Jy/beam
! Combined flux in latest and established models = -0.0214011 Jy
! Performing phase self-cal over 10 minute time intervals
! Adding 27 model components to the UV plane model.
! The established model now contains 115 components and -0.0214011 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.060543Jy  sigma=1.123470
! Fit after  self-cal, rms=0.060340Jy  sigma=1.116286
! Inverting map 
print "************** FINISHED AMPLITUDE GSCALE SELF-CAL **************"
! ************** FINISHED AMPLITUDE GSCALE SELF-CAL ************** 
! 
phase_soltime=phase_soltime2
selfcal false, false, phase_soltime
! Performing phase self-cal over 0.5 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.060340Jy  sigma=1.116286
! Fit after  self-cal, rms=0.052091Jy  sigma=0.939064
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.00481313 Jy
! Component: 100  -  total flux cleaned = -0.00417054 Jy
! Component: 150  -  total flux cleaned = -0.00551263 Jy
! Component: 200  -  total flux cleaned = -0.00570923 Jy
! Total flux subtracted in 200 components = -0.00570923 Jy
! Clean residual min=-0.002704 max=0.002697 Jy/beam
! Clean residual mean=0.000124 rms=0.001359 Jy/beam
! Combined flux in latest and established models = -0.0271104 Jy
! Performing phase self-cal over 0.5 minute time intervals
! Adding 70 model components to the UV plane model.
! The established model now contains 181 components and -0.0271104 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.051103Jy  sigma=0.913716
! Fit after  self-cal, rms=0.050697Jy  sigma=0.905640
! Inverting map 
print "*** FINISHED NATURAL WEIGHTING CLEAN with shorter phase_soltime ***"
! *** FINISHED NATURAL WEIGHTING CLEAN with shorter phase_soltime *** 
! 
dynam = dynam - 0.25
restore
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 23.1 x 40.17 at -10.23 degrees (North through East)
! Clean map  min=-0.059035  max=0.090471 Jy/beam
if(peak(flux) > thresh)
  selfcal true, true, amp_soltime1
  selfcal false, false, phase_soltime
  flux_cutoff = imstat(rms) * dynam
  repeat
    if (peak(flux) > flux_cutoff) peakwin win_mult
    clean clean_niter,clean_gain
    flux_cutoff = imstat(rms) * dynam
    selfcal false,false,phase_soltime
    new_peak = peak(flux)
    until(new_peak<=flux_cutoff)
  selfcal true, true, amp_soltime2
  selfcal false, false, phase_soltime
  flux_cutoff = imstat(rms) * dynam
  repeat
    if (peak(flux) > flux_cutoff) peakwin win_mult
    clean clean_niter,clean_gain
    flux_cutoff = imstat(rms) * dynam
    selfcal false,false,phase_soltime
    new_peak = peak(flux)
    until(new_peak<=flux_cutoff)
  print "************** FINISHED AMPLITUDE SELF-CAL **************"
  end if
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 20 mega-wavelengths.
win_mult = win_mult * 1.4
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=23.37 mas, bmaj=40.24 mas, bpa=-10.47 degrees
! Estimated noise=2.08602 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal false,false,phase_soltime
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.000496311 Jy
! Component: 100  -  total flux cleaned = -0.000312136 Jy
! Component: 150  -  total flux cleaned = -0.000548352 Jy
! Component: 200  -  total flux cleaned = -0.00106152 Jy
! Total flux subtracted in 200 components = -0.00106152 Jy
! Clean residual min=-0.001645 max=0.001623 Jy/beam
! Clean residual mean=-0.000039 rms=0.000667 Jy/beam
! Combined flux in latest and established models = -0.0281719 Jy
! Performing phase self-cal over 0.5 minute time intervals
! Adding 58 model components to the UV plane model.
! The established model now contains 231 components and -0.0281719 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.050304Jy  sigma=0.900126
! Fit after  self-cal, rms=0.050257Jy  sigma=0.899193
! Inverting map 
uvtaper 0
! No UV-taper is currently set.
win_mult = win_mult / 1.4
print "************** FINISHED TAPERING SELF-CAL CLEAN **************"
! ************** FINISHED TAPERING SELF-CAL CLEAN ************** 
! 
print "************** CLEARING MODEL AND STARTING OVER **********"
! ************** CLEARING MODEL AND STARTING OVER ********** 
clrmod true,true,true
! clrmod: Cleared the established, tentative and continuum models.
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
clean clean_niter, clean_gain
! Inverting map and beam 
! Estimated beam: bmin=19.64 mas, bmaj=40.81 mas, bpa=-4.854 degrees
! Estimated noise=2.51552 mJy/beam.
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.12841 Jy
! Component: 100  -  total flux cleaned = 0.166024 Jy
! Component: 150  -  total flux cleaned = 0.166197 Jy
! Component: 200  -  total flux cleaned = 0.164558 Jy
! Total flux subtracted in 200 components = 0.164558 Jy
! Clean residual min=-0.019684 max=0.019643 Jy/beam
! Clean residual mean=0.000476 rms=0.010341 Jy/beam
! Combined flux in latest and established models = 0.164558 Jy
uvw 0,-2
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -2.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Adding 94 model components to the UV plane model.
! The established model now contains 94 components and 0.164558 Jy
! Inverting map and beam 
! Estimated beam: bmin=23.1 mas, bmaj=40.17 mas, bpa=-10.23 degrees
! Estimated noise=2.08528 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  keep
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.0222375 Jy
! Component: 100  -  total flux cleaned = -0.00939589 Jy
! Component: 150  -  total flux cleaned = -0.00166565 Jy
! Component: 200  -  total flux cleaned = 0.00346559 Jy
! Total flux subtracted in 200 components = 0.00346559 Jy
! Clean residual min=-0.014014 max=0.014921 Jy/beam
! Clean residual mean=-0.000668 rms=0.006539 Jy/beam
! Combined flux in latest and established models = 0.168023 Jy
! Adding 69 model components to the UV plane model.
! The established model now contains 163 components and 0.168023 Jy
! Inverting map 
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 20 mega-wavelengths.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=23.37 mas, bmaj=40.24 mas, bpa=-10.47 degrees
! Estimated noise=2.08602 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  keep
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = -0.0100096 Jy
! Component: 100  -  total flux cleaned = -0.014654 Jy
! Component: 150  -  total flux cleaned = -0.0186256 Jy
! Component: 200  -  total flux cleaned = -0.0192738 Jy
! Total flux subtracted in 200 components = -0.0192738 Jy
! Clean residual min=-0.008560 max=0.008668 Jy/beam
! Clean residual mean=0.000669 rms=0.004240 Jy/beam
! Combined flux in latest and established models = 0.14875 Jy
! Adding 45 model components to the UV plane model.
! The established model now contains 206 components and 0.14875 Jy
! Inverting map 
uvtaper 0
! No UV-taper is currently set.
clean
! Inverting map and beam 
! Estimated beam: bmin=23.1 mas, bmaj=40.17 mas, bpa=-10.23 degrees
! Estimated noise=2.08528 mJy/beam.
! clean: niter=200  gain=0.04  cutoff=0
! Component: 050  -  total flux cleaned = 0.00326176 Jy
! Component: 100  -  total flux cleaned = 0.00422953 Jy
! Component: 150  -  total flux cleaned = 0.00487364 Jy
! Component: 200  -  total flux cleaned = 0.0065353 Jy
! Total flux subtracted in 200 components = 0.0065353 Jy
! Clean residual min=-0.004585 max=0.004562 Jy/beam
! Clean residual mean=-0.000152 rms=0.001980 Jy/beam
! Combined flux in latest and established models = 0.155285 Jy
selfcal false, false, phase_soltime
! Performing phase self-cal over 0.5 minute time intervals
! Adding 42 model components to the UV plane model.
! The established model now contains 244 components and 0.155285 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Fit before self-cal, rms=0.049770Jy  sigma=0.897189
! Fit after  self-cal, rms=0.049526Jy  sigma=0.894016
wmodel J0013+7748_S_2006_02_23_yyk\_map.mod
! Writing 244 model components to file: J0013+7748_S_2006_02_23_yyk_map.mod
wobs J0013+7748_S_2006_02_23_yyk\_uvs.fits
! Writing UV FITS file: J0013+7748_S_2006_02_23_yyk_uvs.fits
wwins J0013+7748_S_2006_02_23_yyk\_map.win
! wwins: No CLEAN windows to write.
! Error occured in command: wwins
![Exited script file: muppet]
! 
wmap "J0013+7748_S_2006_02_23_yyk\_map.fits"
! Inverting map 
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 23.1 x 40.17 at -10.23 degrees (North through East)
! Clean map  min=-0.034133  max=0.09265 Jy/beam
! Writing clean map to FITS file: J0013+7748_S_2006_02_23_yyk_map.fits
float peak_flux
peak_flux = peak(flux,max)
print "The peak flux is",peak_flux
! The peak flux is 0.0926498 
invert
! Inverting map 
float image_rms
image_rms = imstat(rms)
print "The final image rms is",image_rms
! The final image rms is 0.00169201 
device "J0013+7748_S_2006_02_23_yyk\_map.eps/VPS"
! Attempting to open device: 'J0013+7748_S_2006_02_23_yyk_map.eps/VPS'
loglevs 100*3*image_rms/peak_flux
! The new contour levels are:
!  -5.47873 5.47873 10.9575 21.9149 43.8298 87.6597
print "clev=",int(3*image_rms*10000)/10000
! clev= 0.005 
print "peak=",int(peak_flux*1000)/1000
! peak= 0.092 
mapcolor none
! Mapplot colormap: none, contrast: 1 brightness: 0.5.
mapplot cln
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 23.1 x 40.17 at -10.23 degrees (North through East)
! Clean map  min=-0.034133  max=0.09265 Jy/beam
mapcolor color, 0.9
! Mapplot colormap: rainbow, contrast: 0.9 brightness: 0.5.
device "J0013+7748_S_2006_02_23_yyk\_map.gif/gif"
! Attempting to open device: 'J0013+7748_S_2006_02_23_yyk_map.gif/gif'
mapplot cln
quit
! Quitting program
! Log file J0013+7748_S_2006_02_23_yyk_uvs.log closed on Wed Jul  5 10:56:52 2006