! Started logfile: /scr/pima/bp171ae_uvs/J1559+2556_C_uvs.log on Fri Oct 11 18:51:31 2013
obs /scr/pima/bp171ae_uvs/J1559+2556_C_uva.fits
! Reading UV FITS file: /scr/pima/bp171ae_uvs/J1559+2556_C_uva.fits
! AN table 1: 45 integrations on 36 of 36 possible baselines.
! Apparent sampling: 0.62284 visibilities/baseline/integration-bin.
! Found source: J1559+2556
! 
! There are 8 IFs, and a total of 8 channels:
! 
!  IF  Channel    Frequency  Freq offset  Number of   Overall IF
!       origin    at origin  per channel   channels    bandwidth
!  ------------------------------------------------------------- (Hz)
!  01        1    4.128e+09      3.2e+07          1      3.2e+07
!  02        2     4.16e+09      3.2e+07          1      3.2e+07
!  03        3    4.192e+09      3.2e+07          1      3.2e+07
!  04        4    4.224e+09      3.2e+07          1      3.2e+07
!  05        5    4.416e+09      3.2e+07          1      3.2e+07
!  06        6    4.512e+09      3.2e+07          1      3.2e+07
!  07        7    4.544e+09      3.2e+07          1      3.2e+07
!  08        8    4.576e+09      3.2e+07          1      3.2e+07
! 
! Polarization(s): RR
! 
! Read 0 lines of history.
! 
! Reading 8072 visibilities.
select RR
! Selecting polarization: RR,  channels: 1..8
! Reading IF 1 channels: 1..1
! Reading IF 2 channels: 2..2
! Reading IF 3 channels: 3..3
! Reading IF 4 channels: 4..4
! Reading IF 5 channels: 5..5
! Reading IF 6 channels: 6..6
! Reading IF 7 channels: 7..7
! Reading IF 8 channels: 8..8
print "field_size =",field_size
! field_size = 1024 
print "field_cell =",field_cell
! field_cell = 0.3 
print "taper_size =",taper_size
! taper_size = 40 
![@/home/lpetrov/bin/01_muppet /scr/pima/bp171ae_uvs/J1559+2556_C]
integer clean_niter
clean_niter = 100
float clean_gain
clean_gain = 0.03
float dynam
dynam = 6.0
float soltime1
soltime1 = 120
float soltime2
soltime2 = 20
float thresh
thresh = 0.5
float win_mult
win_mult = 1.8
float time_av
time_av = 16
float old_peak
float new_peak
float flux_cutoff
mapsize field_size, field_cell
! Map grid = 1024x1024 pixels with 0.300x0.300 milli-arcsec cellsize.
startmod
! Applying default point source starting model.
! Performing phase self-cal
! Adding 1 model components to the UV plane model.
! The established model now contains 1 components and 1 Jy
! 
! Correcting IF 1.
!  A total of 39 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 2.
!  A total of 39 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 3.
!  A total of 39 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 4.
!  A total of 39 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 5.
!  A total of 39 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 6.
!  A total of 39 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 7.
!  A total of 39 telescope corrections were flagged in sub-array 1.
! 
! Correcting IF 8.
!  A total of 39 telescope corrections were flagged in sub-array 1.
! 
! Fit before self-cal, rms=1.000211Jy  sigma=0.948975
! Fit after  self-cal, rms=0.988537Jy  sigma=0.931589
! clrmod: Cleared the established, tentative and continuum models.
! Redundant starting model cleared.
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=1.266 mas, bmaj=3.168 mas, bpa=-8.125 degrees
! Estimated noise=18.5366 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! Added new window around map position (0, 0).
! clean: niter=100  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.0107034 Jy
! Component: 100  -  total flux cleaned = 0.0136938 Jy
! Total flux subtracted in 100 components = 0.0136938 Jy
! Clean residual min=-0.001353 max=0.002313 Jy/beam
! Clean residual mean=0.000000 rms=0.000320 Jy/beam
! Combined flux in latest and established models = 0.0136938 Jy
! Performing phase self-cal
! Adding 6 model components to the UV plane model.
! The established model now contains 6 components and 0.0136938 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.016910Jy  sigma=0.017378
! Fit after  self-cal, rms=0.014391Jy  sigma=0.015077
! Inverting map 
! clean: niter=100  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.00336755 Jy
! Component: 100  -  total flux cleaned = 0.00459725 Jy
! Total flux subtracted in 100 components = 0.00459725 Jy
! Clean residual min=-0.001132 max=0.001974 Jy/beam
! Clean residual mean=-0.000000 rms=0.000251 Jy/beam
! Combined flux in latest and established models = 0.018291 Jy
! Performing phase self-cal
! Adding 7 model components to the UV plane model.
! The established model now contains 9 components and 0.018291 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.014402Jy  sigma=0.013390
! Fit after  self-cal, rms=0.014394Jy  sigma=0.013382
! Inverting map 
! Added new window around map position (1.8, 0.6).
! clean: niter=100  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.00164043 Jy
! Component: 100  -  total flux cleaned = 0.00186532 Jy
! Total flux subtracted in 100 components = 0.00186532 Jy
! Clean residual min=-0.001007 max=0.001406 Jy/beam
! Clean residual mean=-0.000000 rms=0.000224 Jy/beam
! Combined flux in latest and established models = 0.0201564 Jy
! Performing phase self-cal
! Adding 9 model components to the UV plane model.
! The established model now contains 17 components and 0.0201564 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.014378Jy  sigma=0.013048
! Fit after  self-cal, rms=0.014336Jy  sigma=0.013004
! Inverting map 
print "************** FINISHED UNIFORM WEIGHTING CLEAN **************"
! ************** FINISHED UNIFORM WEIGHTING CLEAN ************** 
! 
uvw 0,-1
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
win_mult = win_mult * 1.6
clean_niter = clean_niter * 2
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=1.885 mas, bmaj=3.795 mas, bpa=-5.338 degrees
! Estimated noise=9.28329 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.000856254 Jy
! Component: 100  -  total flux cleaned = 0.00112209 Jy
! Component: 150  -  total flux cleaned = 0.00114331 Jy
! Component: 200  -  total flux cleaned = 0.00114317 Jy
! Total flux subtracted in 200 components = 0.00114317 Jy
! Clean residual min=-0.000642 max=0.000688 Jy/beam
! Clean residual mean=-0.000001 rms=0.000161 Jy/beam
! Combined flux in latest and established models = 0.0212995 Jy
! Performing phase self-cal
! Adding 11 model components to the UV plane model.
! The established model now contains 25 components and 0.0212995 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.014377Jy  sigma=0.012861
! Fit after  self-cal, rms=0.014370Jy  sigma=0.012853
! Inverting map 
print "************** FINISHED NATURAL WEIGHTING CLEAN **************"
! ************** FINISHED NATURAL WEIGHTING CLEAN ************** 
! 
gscale true
! Performing overall amplitude self-cal
! 
! Correcting IF 1.
!  A total of 6 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.00     HN        0.85     KP        0.90     LA        0.98     
!   MK        0.82     NL        0.91     OV        0.95     PT        0.78     
!   SC        0.83     
! 
! 
! Correcting IF 2.
!  A total of 6 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.98     HN        0.85     KP        0.91     LA        1.09     
!   MK        0.90     NL        1.01     OV        0.89     PT        0.89     
!   SC        0.84     
! 
! 
! Correcting IF 3.
!  A total of 6 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.11     HN        0.90     KP        0.54     LA        0.98     
!   MK        0.76     NL        0.85     OV        0.93     PT        0.95     
!   SC        0.76     
! 
! 
! Correcting IF 4.
!  A total of 6 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.92     HN        0.84     KP        0.99     LA        1.12     
!   MK        0.92     NL        0.92     OV        0.92     PT        1.03     
!   SC        1.04     
! 
! 
! Correcting IF 5.
!  A total of 6 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.05     HN        0.87     KP        1.01     LA        1.00     
!   MK        1.10     NL        0.97     OV        0.90     PT        0.89     
!   SC        0.85     
! 
! 
! Correcting IF 6.
!  A total of 6 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.04     HN        0.96     KP        0.99     LA        1.04     
!   MK        0.87     NL        1.01     OV        0.95     PT        1.00     
!   SC        1.02     
! 
! 
! Correcting IF 7.
!  A total of 6 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        0.98     HN        0.88     KP        0.96     LA        1.03     
!   MK        0.94     NL        1.02     OV        0.95     PT        0.94     
!   SC        0.87     
! 
! 
! Correcting IF 8.
!  A total of 6 telescope corrections were flagged in sub-array 1.
!  Telescope amplitude corrections in sub-array 1:
!   BR        1.07     HN        0.86     KP        1.03     LA        0.93     
!   MK        1.00     NL        0.95     OV        0.90     PT        0.96     
!   SC        0.90     
! 
! 
! Fit before self-cal, rms=0.014370Jy  sigma=0.012853
! Fit after  self-cal, rms=0.012895Jy  sigma=0.012070
dynam = dynam - 0.5
flux_cutoff = imstat(rms) * dynam
! Inverting map and beam 
! Estimated beam: bmin=1.845 mas, bmaj=3.774 mas, bpa=-5.866 degrees
! Estimated noise=8.14508 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -0.00185416 Jy
! Component: 100  -  total flux cleaned = -0.00223189 Jy
! Component: 150  -  total flux cleaned = -0.00218268 Jy
! Component: 200  -  total flux cleaned = -0.00213703 Jy
! Total flux subtracted in 200 components = -0.00213703 Jy
! Clean residual min=-0.000409 max=0.000480 Jy/beam
! Clean residual mean=-0.000000 rms=0.000108 Jy/beam
! Combined flux in latest and established models = 0.0191625 Jy
! Performing phase self-cal
! Adding 10 model components to the UV plane model.
! The established model now contains 31 components and 0.0191625 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.012129Jy  sigma=0.012319
! Fit after  self-cal, rms=0.012141Jy  sigma=0.012301
! Inverting map 
selfcal true, true, soltime1
! Performing amp+phase self-cal over 120 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.012141Jy  sigma=0.012301
! Fit after  self-cal, rms=0.011301Jy  sigma=0.011908
dynam = dynam - 0.75
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=1.82 mas, bmaj=3.781 mas, bpa=-6.456 degrees
! Estimated noise=7.19524 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -0.00151427 Jy
! Component: 100  -  total flux cleaned = -0.00185167 Jy
! Component: 150  -  total flux cleaned = -0.00185971 Jy
! Component: 200  -  total flux cleaned = -0.00184982 Jy
! Total flux subtracted in 200 components = -0.00184982 Jy
! Clean residual min=-0.000359 max=0.000369 Jy/beam
! Clean residual mean=-0.000000 rms=0.000087 Jy/beam
! Combined flux in latest and established models = 0.0173127 Jy
selfcal
! Performing phase self-cal
! Adding 11 model components to the UV plane model.
! The established model now contains 40 components and 0.0173127 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.010692Jy  sigma=0.012164
! Fit after  self-cal, rms=0.010695Jy  sigma=0.012159
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 5.9864e-06 Jy
! Component: 100  -  total flux cleaned = 1.46285e-05 Jy
! Component: 150  -  total flux cleaned = 2.72706e-05 Jy
! Component: 200  -  total flux cleaned = 3.579e-05 Jy
! Total flux subtracted in 200 components = 3.579e-05 Jy
! Clean residual min=-0.000357 max=0.000362 Jy/beam
! Clean residual mean=-0.000000 rms=0.000087 Jy/beam
! Combined flux in latest and established models = 0.0173485 Jy
! Performing phase self-cal
! Adding 13 model components to the UV plane model.
! The established model now contains 47 components and 0.0173485 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.010684Jy  sigma=0.012165
! Fit after  self-cal, rms=0.010684Jy  sigma=0.012165
! Inverting map 
selfcal true, true, soltime2
! Performing amp+phase self-cal over 20 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.010684Jy  sigma=0.012165
! Fit after  self-cal, rms=0.009983Jy  sigma=0.011887
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=1.78 mas, bmaj=3.765 mas, bpa=-6.722 degrees
! Estimated noise=6.32734 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -0.00131533 Jy
! Component: 100  -  total flux cleaned = -0.00164422 Jy
! Component: 150  -  total flux cleaned = -0.0017542 Jy
! Component: 200  -  total flux cleaned = -0.0017744 Jy
! Total flux subtracted in 200 components = -0.0017744 Jy
! Clean residual min=-0.000310 max=0.000305 Jy/beam
! Clean residual mean=-0.000000 rms=0.000076 Jy/beam
! Combined flux in latest and established models = 0.0155741 Jy
selfcal
! Performing phase self-cal
! Adding 12 model components to the UV plane model.
! The established model now contains 48 components and 0.0155741 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.009471Jy  sigma=0.012125
! Fit after  self-cal, rms=0.009476Jy  sigma=0.012123
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -1.79531e-05 Jy
! Component: 100  -  total flux cleaned = -4.13696e-06 Jy
! Component: 150  -  total flux cleaned = 3.24314e-06 Jy
! Component: 200  -  total flux cleaned = 8.00104e-06 Jy
! Total flux subtracted in 200 components = 8.00104e-06 Jy
! Clean residual min=-0.000308 max=0.000304 Jy/beam
! Clean residual mean=-0.000000 rms=0.000075 Jy/beam
! Combined flux in latest and established models = 0.0155821 Jy
! Performing phase self-cal
! Adding 10 model components to the UV plane model.
! The established model now contains 52 components and 0.0155821 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.009467Jy  sigma=0.012132
! Fit after  self-cal, rms=0.009467Jy  sigma=0.012131
! Inverting map 
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 40 mega-wavelengths.
win_mult = win_mult * 1.2
selfcal true, true, soltime2
! Performing amp+phase self-cal over 20 minute time intervals
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.009467Jy  sigma=0.012131
! Fit after  self-cal, rms=0.008820Jy  sigma=0.011892
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=4.172 mas, bmaj=5.157 mas, bpa=5.059 degrees
! Estimated noise=6.36056 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -0.00119742 Jy
! Component: 100  -  total flux cleaned = -0.00146903 Jy
! Component: 150  -  total flux cleaned = -0.00154896 Jy
! Component: 200  -  total flux cleaned = -0.00155306 Jy
! Total flux subtracted in 200 components = -0.00155306 Jy
! Clean residual min=-0.000271 max=0.000282 Jy/beam
! Clean residual mean=-0.000000 rms=0.000079 Jy/beam
! Combined flux in latest and established models = 0.014029 Jy
selfcal
! Performing phase self-cal
! Adding 14 model components to the UV plane model.
! The established model now contains 60 components and 0.014029 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.008385Jy  sigma=0.012137
! Fit after  self-cal, rms=0.008384Jy  sigma=0.012126
flux_cutoff = imstat(rms) * dynam
! Inverting map 
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  selfcal
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 4.04246e-06 Jy
! Component: 100  -  total flux cleaned = 1.40183e-06 Jy
! Component: 150  -  total flux cleaned = 2.40378e-06 Jy
! Component: 200  -  total flux cleaned = 2.41658e-06 Jy
! Total flux subtracted in 200 components = 2.41658e-06 Jy
! Clean residual min=-0.000273 max=0.000279 Jy/beam
! Clean residual mean=-0.000000 rms=0.000079 Jy/beam
! Combined flux in latest and established models = 0.0140314 Jy
! Performing phase self-cal
! Adding 7 model components to the UV plane model.
! The established model now contains 63 components and 0.0140314 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.008382Jy  sigma=0.012129
! Fit after  self-cal, rms=0.008382Jy  sigma=0.012128
! Inverting map 
uvtaper 0,0
! No UV-taper is currently set.
win_mult = win_mult / 1.2
print "************** FINISHED AMPLITUDE SELF-CAL **************"
! ************** FINISHED AMPLITUDE SELF-CAL ************** 
restore
! Inverting map and beam 
! Estimated beam: bmin=1.746 mas, bmaj=3.748 mas, bpa=-6.966 degrees
! Estimated noise=5.57644 mJy/beam.
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 1.746 x 3.748 at -6.966 degrees (North through East)
! Clean map  min=-0.00026004  max=0.0094362 Jy/beam
if(peak(flux) > thresh)
  selfcal true, true
  clean clean_niter,clean_gain
  selfcal
  flux_cutoff = imstat(rms) * dynam
  repeat
    if (peak(flux) > flux_cutoff) peakwin win_mult
    clean clean_niter,clean_gain
    flux_cutoff = imstat(rms) * dynam
    selfcal
    new_peak = peak(flux)
    until(new_peak<=flux_cutoff)
  selfcal true, true
  end if
print "************** CLEARING MODEL AND STARTING OVER **********"
! ************** CLEARING MODEL AND STARTING OVER ********** 
clrmod true
! clrmod: Cleared the established and tentative models.
uvw 2,-1
! Uniform weighting binwidth: 2 (pixels).
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=1.187 mas, bmaj=3.182 mas, bpa=-9.473 degrees
! Estimated noise=10.5881 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.00739532 Jy
! Component: 100  -  total flux cleaned = 0.0100388 Jy
! Component: 150  -  total flux cleaned = 0.0114958 Jy
! Component: 200  -  total flux cleaned = 0.0123702 Jy
! Total flux subtracted in 200 components = 0.0123702 Jy
! Clean residual min=-0.000506 max=0.000516 Jy/beam
! Clean residual mean=0.000000 rms=0.000116 Jy/beam
! Combined flux in latest and established models = 0.0123702 Jy
uvw 0,-1
! Uniform weighting is not currently selected.
! Gridding weights will be scaled by errors raised to the power -1.
! Radial weighting is not currently selected.
flux_cutoff = imstat(rms) * dynam
! Adding 20 model components to the UV plane model.
! The established model now contains 20 components and 0.0123702 Jy
! Inverting map and beam 
! Estimated beam: bmin=1.746 mas, bmaj=3.748 mas, bpa=-6.966 degrees
! Estimated noise=5.57644 mJy/beam.
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  keep
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.000787649 Jy
! Component: 100  -  total flux cleaned = 0.00116189 Jy
! Component: 150  -  total flux cleaned = 0.0013644 Jy
! Component: 200  -  total flux cleaned = 0.00145075 Jy
! Total flux subtracted in 200 components = 0.00145075 Jy
! Clean residual min=-0.000272 max=0.000242 Jy/beam
! Clean residual mean=-0.000000 rms=0.000068 Jy/beam
! Combined flux in latest and established models = 0.013821 Jy
! Adding 28 model components to the UV plane model.
! The established model now contains 42 components and 0.013821 Jy
! Inverting map 
uvtaper 0.3,taper_size
! Gaussian taper: value 0.3 at UV radius = 40 mega-wavelengths.
clean clean_niter,clean_gain
! Inverting map and beam 
! Estimated beam: bmin=4.172 mas, bmaj=5.157 mas, bpa=5.059 degrees
! Estimated noise=6.36056 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 0.000139709 Jy
! Component: 100  -  total flux cleaned = 0.000162704 Jy
! Component: 150  -  total flux cleaned = 0.00016884 Jy
! Component: 200  -  total flux cleaned = 0.000168849 Jy
! Total flux subtracted in 200 components = 0.000168849 Jy
! Clean residual min=-0.000272 max=0.000286 Jy/beam
! Clean residual mean=-0.000000 rms=0.000080 Jy/beam
! Combined flux in latest and established models = 0.0139898 Jy
flux_cutoff = imstat(rms) * dynam
repeat
  if (peak(flux) > flux_cutoff) peakwin win_mult
  clean clean_niter,clean_gain
  flux_cutoff = imstat(rms) * dynam
  keep
  new_peak = peak(flux)
  until(new_peak<=flux_cutoff)
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = 1.79957e-06 Jy
! Component: 100  -  total flux cleaned = 3.46025e-06 Jy
! Component: 150  -  total flux cleaned = 6.40977e-06 Jy
! Component: 200  -  total flux cleaned = 7.82007e-06 Jy
! Total flux subtracted in 200 components = 7.82007e-06 Jy
! Clean residual min=-0.000273 max=0.000284 Jy/beam
! Clean residual mean=-0.000000 rms=0.000080 Jy/beam
! Combined flux in latest and established models = 0.0139977 Jy
! Adding 17 model components to the UV plane model.
! The established model now contains 55 components and 0.0139977 Jy
! Inverting map 
uvtaper 0,0
! No UV-taper is currently set.
clean
! Inverting map and beam 
! Estimated beam: bmin=1.746 mas, bmaj=3.748 mas, bpa=-6.966 degrees
! Estimated noise=5.57644 mJy/beam.
! clean: niter=200  gain=0.03  cutoff=0
! Component: 050  -  total flux cleaned = -4.18554e-05 Jy
! Component: 100  -  total flux cleaned = -4.18773e-05 Jy
! Component: 150  -  total flux cleaned = -4.18829e-05 Jy
! Component: 200  -  total flux cleaned = -4.18435e-05 Jy
! Total flux subtracted in 200 components = -4.18435e-05 Jy
! Clean residual min=-0.000278 max=0.000251 Jy/beam
! Clean residual mean=-0.000000 rms=0.000067 Jy/beam
! Combined flux in latest and established models = 0.0139558 Jy
selfcal
! Performing phase self-cal
! Adding 13 model components to the UV plane model.
! The established model now contains 64 components and 0.0139558 Jy
! 
! Correcting IF 1.
! 
! Correcting IF 2.
! 
! Correcting IF 3.
! 
! Correcting IF 4.
! 
! Correcting IF 5.
! 
! Correcting IF 6.
! 
! Correcting IF 7.
! 
! Correcting IF 8.
! 
! Fit before self-cal, rms=0.008370Jy  sigma=0.012149
! Fit after  self-cal, rms=0.008369Jy  sigma=0.012147
wmodel /scr/pima/bp171ae_uvs/J1559+2556_C_map.mod
! Writing 64 model components to file: /scr/pima/bp171ae_uvs/J1559+2556_C_map.mod
wobs /scr/pima/bp171ae_uvs/J1559+2556_C_uvs.fits
! Writing UV FITS file: /scr/pima/bp171ae_uvs/J1559+2556_C_uvs.fits
wwins /scr/pima/bp171ae_uvs/J1559+2556_C_map.win
! wwins: Wrote 2 windows to /scr/pima/bp171ae_uvs/J1559+2556_C_map.win
x = (field_size-8) * field_cell / 4
addwin -x,x,-x,x
clean (field_size*4),0.01
! Inverting map 
! clean: niter=4096  gain=0.01  cutoff=0
! Component: 050  -  total flux cleaned = -0.000101336 Jy
! Component: 100  -  total flux cleaned = -0.000170602 Jy
! Component: 150  -  total flux cleaned = -0.000223541 Jy
! Component: 200  -  total flux cleaned = -0.000249139 Jy
! Component: 250  -  total flux cleaned = -0.000253221 Jy
! Component: 300  -  total flux cleaned = -0.000261197 Jy
! Component: 350  -  total flux cleaned = -0.000261254 Jy
! Component: 400  -  total flux cleaned = -0.000272653 Jy
! Component: 450  -  total flux cleaned = -0.000268956 Jy
! Component: 500  -  total flux cleaned = -0.000268965 Jy
! Component: 550  -  total flux cleaned = -0.000268954 Jy
! Component: 600  -  total flux cleaned = -0.000262027 Jy
! Component: 650  -  total flux cleaned = -0.000265558 Jy
! Component: 700  -  total flux cleaned = -0.000272323 Jy
! Component: 750  -  total flux cleaned = -0.000275601 Jy
! Component: 800  -  total flux cleaned = -0.000285359 Jy
! Component: 850  -  total flux cleaned = -0.000285344 Jy
! Component: 900  -  total flux cleaned = -0.000288528 Jy
! Component: 950  -  total flux cleaned = -0.000288546 Jy
! Component: 1000  -  total flux cleaned = -0.000285456 Jy
! Component: 1050  -  total flux cleaned = -0.00027333 Jy
! Component: 1100  -  total flux cleaned = -0.000267349 Jy
! Component: 1150  -  total flux cleaned = -0.000261457 Jy
! Component: 1200  -  total flux cleaned = -0.000249755 Jy
! Component: 1250  -  total flux cleaned = -0.000246789 Jy
! Component: 1300  -  total flux cleaned = -0.000232429 Jy
! Component: 1350  -  total flux cleaned = -0.000226753 Jy
! Component: 1400  -  total flux cleaned = -0.000221153 Jy
! Component: 1450  -  total flux cleaned = -0.000210081 Jy
! Component: 1500  -  total flux cleaned = -0.000215572 Jy
! Component: 1550  -  total flux cleaned = -0.000201951 Jy
! Component: 1600  -  total flux cleaned = -0.000191168 Jy
! Component: 1650  -  total flux cleaned = -0.000188505 Jy
! Component: 1700  -  total flux cleaned = -0.000185894 Jy
! Component: 1750  -  total flux cleaned = -0.000185892 Jy
! Component: 1800  -  total flux cleaned = -0.000185878 Jy
! Component: 1850  -  total flux cleaned = -0.000188485 Jy
! Component: 1900  -  total flux cleaned = -0.000191019 Jy
! Component: 1950  -  total flux cleaned = -0.000190979 Jy
! Component: 2000  -  total flux cleaned = -0.000178461 Jy
! Component: 2050  -  total flux cleaned = -0.000193428 Jy
! Component: 2100  -  total flux cleaned = -0.000195871 Jy
! Component: 2150  -  total flux cleaned = -0.000190964 Jy
! Component: 2200  -  total flux cleaned = -0.000198257 Jy
! Component: 2250  -  total flux cleaned = -0.000200668 Jy
! Component: 2300  -  total flux cleaned = -0.000207826 Jy
! Component: 2350  -  total flux cleaned = -0.00019832 Jy
! Component: 2400  -  total flux cleaned = -0.000212449 Jy
! Component: 2450  -  total flux cleaned = -0.000210089 Jy
! Component: 2500  -  total flux cleaned = -0.000217067 Jy
! Component: 2550  -  total flux cleaned = -0.000214778 Jy
! Component: 2600  -  total flux cleaned = -0.000219368 Jy
! Component: 2650  -  total flux cleaned = -0.000233018 Jy
! Component: 2700  -  total flux cleaned = -0.00022397 Jy
! Component: 2750  -  total flux cleaned = -0.000235198 Jy
! Component: 2800  -  total flux cleaned = -0.000239653 Jy
! Component: 2850  -  total flux cleaned = -0.00024185 Jy
! Component: 2900  -  total flux cleaned = -0.000248469 Jy
! Component: 2950  -  total flux cleaned = -0.000255015 Jy
! Component: 3000  -  total flux cleaned = -0.000252846 Jy
! Component: 3050  -  total flux cleaned = -0.000265821 Jy
! Component: 3100  -  total flux cleaned = -0.00026582 Jy
! Component: 3150  -  total flux cleaned = -0.000274374 Jy
! Component: 3200  -  total flux cleaned = -0.000272246 Jy
! Component: 3250  -  total flux cleaned = -0.000278549 Jy
! Component: 3300  -  total flux cleaned = -0.000282763 Jy
! Component: 3350  -  total flux cleaned = -0.000291077 Jy
! Component: 3400  -  total flux cleaned = -0.000297296 Jy
! Component: 3450  -  total flux cleaned = -0.000299356 Jy
! Component: 3500  -  total flux cleaned = -0.000305505 Jy
! Component: 3550  -  total flux cleaned = -0.000307536 Jy
! Component: 3600  -  total flux cleaned = -0.000313597 Jy
! Component: 3650  -  total flux cleaned = -0.000313607 Jy
! Component: 3700  -  total flux cleaned = -0.000317606 Jy
! Component: 3750  -  total flux cleaned = -0.000327565 Jy
! Component: 3800  -  total flux cleaned = -0.00032757 Jy
! Component: 3850  -  total flux cleaned = -0.00033545 Jy
! Component: 3900  -  total flux cleaned = -0.000345212 Jy
! Component: 3950  -  total flux cleaned = -0.000345208 Jy
! Component: 4000  -  total flux cleaned = -0.000352922 Jy
! Component: 4050  -  total flux cleaned = -0.000362529 Jy
! Total flux subtracted in 4096 components = -0.000368248 Jy
! Clean residual min=-0.000098 max=0.000103 Jy/beam
! Clean residual mean=-0.000000 rms=0.000035 Jy/beam
! Combined flux in latest and established models = 0.0135876 Jy
keep
! Adding 303 model components to the UV plane model.
! The established model now contains 367 components and 0.0135876 Jy
![Exited script file: /home/lpetrov/bin/01_muppet]
wmap "/scr/pima/bp171ae_uvs/J1559+2556_C\_map.fits"
! Inverting map 
! restore: Substituting estimate of restoring beam from last 'invert'.
! Restoring with beam: 1.746 x 3.748 at -6.966 degrees (North through East)
! Clean map  min=-0.00018733  max=0.0094898 Jy/beam
! Writing clean map to FITS file: /scr/pima/bp171ae_uvs/J1559+2556_C_map.fits
float peak_flux
peak_flux = peak(flux,max)
print "The peak flux is",peak_flux
! The peak flux is 0.00948982 
invert
! Inverting map 
float image_rms
image_rms = imstat(rms)
print "The final image rms is",image_rms
! The final image rms is 3.52288e-05 
loglevs 100*3*image_rms/peak_flux
! The new contour levels are:
!  -1.11368 1.11368 2.22736 4.45473 8.90946 17.8189 35.6378 71.2757
print "clev=",int(3*image_rms*10000)/10000
! clev= 0.0001 
print "peak=",int(1000*peak_flux)/1000
! peak= 0.009 
quit
! Quitting program
! Log file /scr/pima/bp171ae_uvs/J1559+2556_C_uvs.log closed on Fri Oct 11 18:51:36 2013